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Protein Overview: f-cup-PA

General Information:
Name(s) found: f-cup-PA / FBpp0082311 [FlyBase]
Description(s) found:
Found 17 descriptions.
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  • The gene flyers-cup is referred to in FlyBase by the symbol Dmel\f-cup (CG9611, FBgn0028487). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:9520979..9526560. It has the cytological map location 87F11. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: Ras protein signal transduction. 3 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 693 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: Ras protein signal transduction [ISS]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNLSNVELG SFRGAQECDQ ASAFGGDFDF GHSCFTHYGC PSDMSDKTGR GRSNPSTSRI  60
   61 PRSAQSPRQA SVVHSPRTNC AFRPIFHERS THEDDQVLTQ ELWKLARKSG TLNLSNKALA 120
  121 RVPKRLYDIN EADADSKAVN LEQLTIKEED AWWNQVPLNN LDLSSNTLTH ISPKIENLQS 180
  181 LTVLTLHDNA LVELPPEIGK LEKLVRLNVS HNKLSQLPRA MYSLPELRHL NISYNEFVEL 240
  241 NPDISDLHML EFLDGGHNNI QSLPGGIGFL VRLTALLLPY NHIKELPPDL VNMRSLQKID 300
  301 LMHNDLTSLP EDMGLLRKLD CLYLQHNDIL ELPEFEGNEA LNELHASNNF IKIIPKAMCS 360
  361 NLPHLKILDL RDNKITELPD ELCLLRNLNR LDVSNNTISV LPVTLSSLAH LISLQVEGNP 420
  421 IKTIRRDILQ CGTTRILKTL HDRAVAKAKE EGGGVDDAST SAGISVTRLR GGQMDDGDIP 480
  481 GNFPDRYKLR HTRTLAVNLE ELTSVPDQVF QIARDEGVHV VDFARNQLST LPNGLQHMKD 540
  541 LVTELVLSNN VIGYVPQFIS QFTRISFLNL SNNLLNDLPT EFGVLNTLRE LNIANNRFPC 600
  601 IPNCVYELQG LEILIASENH IKMLNVSGLQ NMRRLSTLDL RNNDIETVPP ILGNLTNITH 660
  661 LELVGNPFRQ PRHQILMKGT DAIMSYLRDR IPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 12.69897 No description for 2z80A was found.
    2 View Details [87..693] PSI-BLAST 42.69897 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle