| Protein: | f-cup-PA |
| Organism: | Drosophila melanogaster |
| Length: | 693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for f-cup-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
462.0 | [0..5] | [690..82] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MMNLSNVELG SFRGAQECDQ ASAFGGDFDF GHSCFTHYGC PSDMSDKTGR GRSNPSTSRI 60
61 PRSAQSPRQA SVVHSPRTNC AFRPIF
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 2z80A |
| Description: | No description for 2z80A was found. |
|
Region A: Residues: [87-693] |
1 11 21 31 41 51
| | | | | |
1 HERSTHEDDQ VLTQELWKLA RKSGTLNLSN KALARVPKRL YDINEADADS KAVNLEQLTI 60
61 KEEDAWWNQV PLNNLDLSSN TLTHISPKIE NLQSLTVLTL HDNALVELPP EIGKLEKLVR 120
121 LNVSHNKLSQ LPRAMYSLPE LRHLNISYNE FVELNPDISD LHMLEFLDGG HNNIQSLPGG 180
181 IGFLVRLTAL LLPYNHIKEL PPDLVNMRSL QKIDLMHNDL TSLPEDMGLL RKLDCLYLQH 240
241 NDILELPEFE GNEALNELHA SNNFIKIIPK AMCSNLPHLK ILDLRDNKIT ELPDELCLLR 300
301 NLNRLDVSNN TISVLPVTLS SLAHLISLQV EGNPIKTIRR DILQCGTTRI LKTLHDRAVA 360
361 KAKEEGGGVD DASTSAGISV TRLRGGQMDD GDIPGNFPDR YKLRHTRTLA VNLEELTSVP 420
421 DQVFQIARDE GVHVVDFARN QLSTLPNGLQ HMKDLVTELV LSNNVIGYVP QFISQFTRIS 480
481 FLNLSNNLLN DLPTEFGVLN TLRELNIANN RFPCIPNCVY ELQGLEILIA SENHIKMLNV 540
541 SGLQNMRRLS TLDLRNNDIE TVPPILGNLT NITHLELVGN PFRQPRHQIL MKGTDAIMSY 600
601 LRDRIPT
|
| Detection Method: | |
| Confidence: | 42.69897 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
