Protein Overview: FBpp0305647

General Information:
Name(s) found:	FBpp0305647 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|45551817\|ref\|NP_730660.2\| Smc5, isoform B [Drosophila melanogaster] [NCBI NR] gi\|45446071\|gb\|AAN12180.2\| Smc5, isoform B [Drosophila melanogaster] [NCBI NR] type=protein; loc=3L:join(21562479..21562552,21562621..21562993,21563057..21563235,21563357..21563603,21563820..21564107,21564162..21564263,21564322..21564530,21564590..21564753,21564832..21565161,21565217..21565434,21565491..21565715,21565786..21566010,21566103..21566233,21566290..21566407,21566468..21566563); ID=FBpp0305647; name=Smc5-PH; parent=FBgn0052438,FBtr0333456; dbxref=REFSEQ:NP_649334,GB_protein:AAF51749,FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r5.56; species=Dmel; [FlyBase] (AAN12180) CG32438-PB (Fragment) [DrosMelano7227.FASTAC.txt] CG32438-PB, isoform B [Drosophila melanogaster]gi\|45551817\|ref\|NP_730660.2\| CG32438-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas] type=protein; loc=3L:join(21562479..21562552,21562621..21562993,21563057..21563235,21563357..21563603,21563820..21564107,21564162..21564263,21564322..21564530,21564590..21564753,21564832..21565161,21565217..21565434,21565491..21565715,21565786..21566010,2 [fly-100309-contam.fasta] Smc5 CG32438-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta] CG32438-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=3L:join(21562479..21562552,21562621..21562993,21563057..21563235,21563357..21563603,21563820..21564107,21564162..21564263,21564322..21564530,21564590..21564753,21564832..21565161,21565217..21565434,21565491..21565715,21565786..21566010,21566103..21566233,21566290..21566407,21566468..21566563); ID=FBpp0078029; name=Smc5-PB; parent=FBgn0052438,FBtr0078373; dbxref=GB_protein:AAN12180.2,FlyBase:FBpp0078029,FlyBase_Annotation_IDs:CG32438-PB,REFSEQ:NP_730660,GB_protein:AAN12180; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:join(21562479..21562552,21562621..21562993,21563057..21563235,21563357..21563603,21563820..21564107,21564162..21564263,21564322..21564530,21564590..21564753,21564832..21565161,21565217..21565434,21565491..21565715,21565786..21566010,21566103..21566233,21566290..21566407,21566468..21566563); ID=FBpp0305647; name=Smc5-PH; parent=FBgn0052438,FBtr0333456; dbxref=FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=3L:join(21569379..21569452,21569521..21569893,21569957..21570135,21570257..21570503,21570720..21571007,21571062..21571163,21571222..21571430,21571490..21571653,21571732..21572061,21572117..21572334,21572391..21572615,21572686..21572910,21573003..21573133,21573190..21573307,21573368..21573463); ID=FBpp0305647; name=SMC5-PH; parent=FBgn0052438,FBtr0333456; dbxref=REFSEQ:NP_649334,GB_protein:AAF51749,FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:join(21569379..21569452,21569521..21569893,21569957..21570135,21570257..21570503,21570720..21571007,21571062..21571163,21571222..21571430,21571490..21571653,21571732..21572061,21572117..21572334,21572391..21572615,21572686..21572910,21573003..21573133,21573190..21573307,21573368..21573463); ID=FBpp0305647; name=SMC5-PH; parent=FBgn0052438,FBtr0333456; dbxref=REFSEQ:NP_649334,GB_protein:AAF51749,FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of Q8IPT2, Structural maintenance of chromosomes 5, isoform H OS=Drosophila melanogaster GN=SMC5 PE=1 SV=3 [DROME.fasta.20160308] FBpp0305647 type=protein; loc=3L:join(21569379..21569452,21569521..21569893,21569957..21570135,21570257..21570503,21570720..21571007,21571062..21571163,21571222..21571430,21571490..21571653,21571732..21572061,21572117..21572334,21572391..21572615,21572686..21572910,21573003..21573133,21573190..21573307,21573368..21573463); ID=FBpp0305647; name=SMC5-PH; parent=FBgn0052438,FBtr0333456; dbxref=REFSEQ:NP_649334,GB_protein:AAF51749,FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=3L:join(21569379..21569452,21569521..21569893,21569957..21570135,21570257..21570503,21570720..21571007,21571062..21571163,21571222..21571430,21571490..21571653,21571732..21572061,21572117..21572334,21572391..21572615,21572686..21572910,21573003..21573133,21573190..21573307,21573368..21573463); ID=FBpp0305647; name=SMC5-PH; parent=FBgn0052438,FBtr0333456; dbxref=REFSEQ:NP_649334,GB_protein:AAF51749,FlyBase:FBpp0305647,FlyBase_Annotation_IDs:CG32438-PH,UniProt/TrEMBL:Q9VP12; MD5=560f1155ad922f65b951f77f6796eb14; length=992; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	992 amino acids
Gene Ontology:
Cellular Component:	nucleus [ISS] chromosome [IEA] condensin complex [NAS]
Biological Process:	mitotic sister chromatid segregation [NAS] mitosis [NAS]
Molecular Function:	ATP binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDRALSSK QLAGRIHSVY CKDFVSYSEI TFHPKHYLNV LTGPNGSGKS TIVSAIILGL  60
   61 GGEPILLDRS ASVADYIQSN KTSATIIVRV YGRTPNTTET FRRIINSNGL STFSVNDKDT 120
  121 SKKNFLAAVS SFNIQVSNLC QFLPQDRVQD FSKMNPQELL LNTMSSVCDE DLINSFNSLK 180
  181 QMRTEQANVH ANREKEKSDL VKKQKRLEHL QMTVSQYKER EEVKQKLQVY SAKKLWVETQ 240
  241 AGEAKAAEMK TQVKNAKTQS DKLKNQHDKL LQSQEQIEKE KESLRKALLE KQNIKKSRRT 300
  301 ATECDNLNQL VENKIYELET LNKSRPLIVS ELERAKESCA AARGKAMEQY SRRRQLEQKL 360
  361 NDEMIPEITA YKLKIERLRN VKMQKIDEIR AKNPNLVVAM NWLAQNKQRY KLNVYDPMIL 420
  421 ELTVQNHEDA KFLENVVAQR DLFAFACEDK GDMSDLINEL CVKQKLGVNV IYCAPSDRLV 480
  481 YSPKTPIDDL RSFGFRSYLV DLVTGPIPLI NKLCASYSIH NIPIGTEAVG NYTSSIPKAI 540
  541 RVYFGGSKKF VVTASRYRSD TILTESSIRA KNQLITVDSQ QLALVMKQCS EAVKESDSIK 600
  601 NAITQTDNEF ERLQAVAKDE QEKRRKLDQK IAHFNSLKTE IETLQKKLEA LRNSDSLDCL 660
  661 ETNFCNSLHK DLKKIFDADA ELCSCLKAID RLIIEKNMAQ TKVSIYMLQH ETQIEALKES 720
  721 EEQSKAATRD FQQLLQCLEN QISDVNKRKS AIQGLCHGEI PTSSKFPFKK EFRELENIDL 780
  781 PELREAIHDF QARLECMKSV NSEAISSYQG LQNEVKQLEE GIQESVNQAK SIESGMSNLY 840
  841 DKWEPKLNSL VETISTKFSE FMESIEYVGE VVLSKTDKIM VQFRRGLQLQ PLDKFIQSGG 900
  901 ERAVSIAIYS LSLQHVTHVP FRCVDEINQG MDATNERHIF DLLLKEATKH GSAQYLFVTP 960
  961 KLLRDLNYNE HLCVSIVHNS KTVCHGMQFP MA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: FBpp0305647

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: