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Protein Overview: Chi-PB

General Information:
Name(s) found: Chi-PB / FBpp0072101 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • The gene Chip is referred to in FlyBase by the symbol Dmel\Chi (CG3924, FBgn0013764). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19919062..19921459. It has the cytological map location 60B5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transcription cofactor activity. There is experimental evidence that it is involved in the biological process</span>: axon guidance; nervous system development; bristle morphogenesis; imaginal disc-derived wing morphogenesis; positive regulation of transcription; transcription; phagocytosis, engulfment. 32 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: adult segment; adult mesothoracic segment; organ system; thoracic segment; appendage segment; metatarsus; integumentary plate; peripheral nervous system; embryonic neuron; postalar bristle. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 596 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: bristle morphogenesis [IMP]
    phagocytosis, engulfment [IMP]
    transcription [IMP]
    blastoderm segmentation [TAS]
    nervous system development [IMP]
    imaginal disc-derived wing morphogenesis [IMP]
    axon guidance [IMP]
    positive regulation of transcription [IMP]
    Molecular Function: transcription cofactor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCDIQTSRR ECPIEPTTGM NRRGLNAGNT MTSQANIDDG SWKAVSEGGS MLPASNSAVL  60
   61 NPDGSNQSGF AQGGLPYNSA GNPYPPAGQS SPAGNQSIVF QNSNQPGSNT PQYTSSPAPS 120
  121 GSSTPGPVGA QNIPGNYPQS ATAGNFNGPV GGPFGSPSSG LGQFSRPASS GTPFNSGQAG 180
  181 HFSSPTVFSV GGQFNPMPPA SPFGHGGNHP MMGGPQQMER IDQGFRRHNS YFSHTEHRVF 240
  241 ELNKRLQQRN EESDNCWWDS FTTEFFEDDA RLTILFCLED GPKRYTIGRT LIPRFFRSIY 300
  301 EGGVSDLYFQ LKHAKESFHN TSITLDCDQC TVITQHGKPF FTKVCADARL ILEFMYDDYM 360
  361 RIKSWHMTIK GHRELIPRSV IGTSLPPDPM LLDQITKNIT RAGITNSTLN YLRLCVILEP 420
  421 MQELMSRHKA YALSPRDCLK TTLFQKWQRM VAPPGKKDPQ RPPNKRRKRK GSNSGGGNNS 480
  481 NTPPVTNQKR SPSGPSFSLS SQDVMVVGEP TLMGGEFGEE DERLITRLEN TQYDGTNAVE 540
  541 HDNHTGFGHA DSPISGSNPW SIDRAGAIPA SPGNGAAPQN NANISDIDKK SPIVSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] PSI-BLAST 24.0 No description for 1y0fB was found.
    2 View Details [255..496] deduced N/A No confident structure predictions are available.
    3 View Details [497..596] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle