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Protein Overview: CBP-PB

General Information:
Name(s) found: CBP-PB / FBpp0089293 [FlyBase]
Description(s) found:
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  • gi|45554312|ref|NP_996361.1| sarcoplasmic calcium-binding protein, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|45446837|gb|AAS65270.1| sarcoplasmic calcium-binding protein, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene sarcoplasmic calcium-binding protein is referred to in FlyBase by the symbol Dmel\CBP (CG1435, FBgn0026144). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7231403..7236768. It has the cytological map location 7B2. Based on sequence similarity, it is predicted to have molecular function</span>: calcium ion binding. The biological processes in which it is involved are not known. 15 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (AAS65270) CG1435-PB [DrosMelano7227.FASTAC.txt]
  • CG1435-PB, isoform B [Drosophila melanogaster]gi|45554312|ref|NP_996361.1| CG1435-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(7234397..7234549,7235228..7235536,7235607..7235840); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS652 [fly-100309-contam.fasta]
  • sarcoplasmic calcium-binding protein CG1435-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG1435-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(7234397..7234549,7235228..7235536,7235607..7235840); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(7234397..7234549,7235228..7235536,7235607..7235840); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Sarcoplasmic calcium-binding protein, isoform B OS=Drosophila melanogaster GN=CBP PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(7234397..7234549,7235228..7235536,7235607..7235840); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270,FlyMine:FBpp0089293,modMine:FBpp0089293; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(7340364..7340516,7341195..7341503,7341574..7341807); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270,FlyMine:FBpp0089293,modMine:FBpp0089293; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(7340364..7340516,7341195..7341503,7341574..7341807); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270,FlyMine:FBpp0089293,modMine:FBpp0089293; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of M9PHB8, Sarcoplasmic calcium-binding protein, isoform B OS=Drosophila melanogaster GN=CBP PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0089293 type=protein; loc=X:join(7340364..7340516,7341195..7341503,7341574..7341807); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270,FlyMine:FBpp0089293,modMine:FBpp0089293; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(7340364..7340516,7341195..7341503,7341574..7341807); ID=FBpp0089293; name=CBP-PB; parent=FBgn0026144,FBtr0071053; dbxref=FlyBase:FBpp0089293,FlyBase_Annotation_IDs:CG1435-PB,GB_protein:AAS65270.1,REFSEQ:NP_996361,GB_protein:AAS65270,UniProt/TrEMBL:Q7KVU4,FlyMine:FBpp0089293,modMine:FBpp0089293; MD5=4dbb84d15c34e6a2ffdb80dcc2012033; length=231; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: sarcoplasmic reticulum [ISS]
    Biological Process: NONE FOUND
    Molecular Function: calcium ion binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAVVQAVR QYSKKAGAAK LRREVESDSD SDSDDEFERR RQKMDSKRSE RGDSAFWRRK  60
   61 MRTLHRILDV NHDGVVSFDD FSLLAKRFSD LGHLTPEVAA EFNDVIKHTW EEQFGEITPY 120
  121 NLVTAEQFLT DLHHRLNDKK MAKRIGRFLP YLFKAVDFDH TGHLDLEQYK LFFRCLGLTE 180
  181 DDAAVSFAVI DKNGDGQLSL KEFVHLGRQF FLTEDDSKIS KMFWGPLVAD H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 12.39794 Solution structure and dynamics of Nereis sarcoplasmic calcium binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.39263455617025 bayes_pls_golite062009
  • calcium ion binding
    		•  0.326789035157241 bayes_pls_golite062009
  • ion binding
    		•  0.228888934051136 bayes_pls_golite062009
  • cation binding
    		•  0.227323129980928 bayes_pls_golite062009
  • metal ion binding
    		•  0.227323129980928 bayes_pls_golite062009
  • protein binding
    		•  0.0504192768094249 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle