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View Structure Prediction Details

Protein: CBP-PB
Organism: Drosophila melanogaster
Length: 231 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP-PB.

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
197.0 [0..50] [210..512]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAVVQAVR QYSKKAGAAK LRREVESDSD SDSDDEFERR RQKMDSKRSE RGDSAFWRRK  60
   61 MRTLHRILDV NHDGVVSFDD FSLLAKRFSD LGHLTPEVAA EFNDVIKHTW EEQFGEITPY 120
  121 NLVTAEQFLT DLHHRLNDKK MAKRIGRFLP YLFKAVDFDH TGHLDLEQYK LFFRCLGLTE 180
  181 DDAAVSFAVI DKNGDGQLSL KEFVHLGRQF FLTEDDSKIS KMFWGPLVAD H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 1q80A
Description: Solution structure and dynamics of Nereis sarcoplasmic calcium binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.39263455617025 bayes_pls_golite062009
calcium ion binding 0.326789035157241 bayes_pls_golite062009
ion binding 0.228888934051136 bayes_pls_golite062009
cation binding 0.227323129980928 bayes_pls_golite062009
metal ion binding 0.227323129980928 bayes_pls_golite062009
protein binding 0.0504192768094249 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle