Protein Overview: gi|186488168

General Information:
Name(s) found:	gi\|186488168 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|186488168\|ref\|NP_001117406.1\| Smg-4/UPF3 family protein [Arabidopsis thaliana] [NCBI NR] \| Symbols: ATUPF3, UPF3 \| ATUPF3/UPF3; nucleotide binding \| chr1:12351699-12354381 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] \| Symbols: ATUPF3, UPF3 \| Smg-4/UPF3 family protein \| chr1:12351719-12354401 FORWARD LENGTH=484 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] Isoform 2 of Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana GN=UPF3 [ARATH-contam.fasta] Isoform of Q9FVW4, Isoform 2 of Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana GN=UPF3 [ARATH.fasta.20160308]
Organism:	Arabidopsis thaliana
Length:	484 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IMP]
Molecular Function:	nucleotide binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEPLQKKKV VVRHLPPSLS QSDLLSQIDP RFADRYNWVS FRPGKSRLGY KNQKYSRAYV  60
   61 SFKAPEDVYE FAAFFNGHVF VNEKGAQFKA IVEYAPSQRV PKPSDKKDPR EGSISKDPDY 120
  121 LEFLKVIAQP VENLPSAEIQ LERREAEQSG ASKAAPIVTP LMEFIRQKRA TVMGPQGLSD 180
  181 IRRGGRRTRV VSANKPSPRP SKRNSEKKKY VEKESSKNVP RKTTADVSSS KPDYRQSNSS 240
  241 GKELPGNETA AIIDSSPPGI ALTMDSGKKK ILLLRSKDRD NPDNPPPQPE QHIDTNLSRN 300
  301 STDSRQNQKS DVGGRLIKGI LLRNDSRPSQ SSTFVQSEQR VEPSEAENYK RPSRPANTRA 360
  361 GKDYHTSGTI SEKQERRTRN KDRPDRVMWA PRRDGSEDQP LSSAGNNGEV KDRMFSQRSG 420
  421 EVVNSSGGHT LENGSARHSS RRVGGRNRKE EVVIGEGKTS RRGSGGGPSS HEKQMWIQKP 480
  481 SSGT

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|186488168

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: