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Protein Overview: gi|42716297

General Information:
Name(s) found: gi|42716297 [NCBI NR]
Description(s) found:
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  • gi|42716297|ref|NP_001822.2| clusterin isoform 1 [Homo sapiens] [NCBI NR]
  • clusterin isoform 1; complement-associated protein SP-40 [HMR_022704.fasta]
  • clusterin isoform 1 [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 clusterin isoform 1 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • Tax_Id=9606 Clusterin isoform 1 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • Tax_Id=9606 Clusterin isoform 1 [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • clusterin isoform 1; complement-associated protein SP-40 [Homo sapiens] [HumanGallus06162005.fasta]
  • Tax_Id=9606 CLUSTERIN ISOFORM 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=CLU clusterin isoform 1 [human-ipi-250309-contam.fasta]
  • IPI:IPI00400826.1|SWISS-PROT:P10909-2|ENSEMBL:ENSP00000315130|REFSEQ:NP_001822|VEGA:OTTHUMP00000128311 Tax_Id=9606 Gene_Symbol=CLU Isoform 2 of Clusterin [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=CLU clusterin isoform 1 ENSG00000120885 IPI00400826 IPI00291262 IPI00791571 IPI00795633 IPI00793848 [drosphohumanreversed.fasta]
  • Tax_Id=9606 Gene_Symbol=CLU Isoform 2 of Clusterin [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • Isoform 2 of Clusterin OS=Homo sapiens GN=CLU [011711_HMR.fasta]
  • GeneSymbol=CLU Synonyms=APOJ|CLI|KUB1|MGC24903|SGP-2|SGP2|SP-40|TRPM-2|TRPM2 clusterin isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00400826.1|SWISS-PROT:P10909-2|ENSEMBL:ENSP00000315130|VEGA:OTTHUMP00000128311 Tax_Id=9606 Gene_Symbol=CLU Isoform 2 of Clusterin [ipi.HUMAN.20110912.fasta]
  • Isoform 2 of Clusterin GN=CLU [Doctor+uniprot-HUMAN-120911.fasta]
  • Isoform of P10909, Isoform 2 of Clusterin OS=Homo sapiens GN=CLU [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVCSQPQRG CVREQSAINT APPSAHNAAS PGGARGHRVP LTEACKDSRI GGMMKTLLLF  60
   61 VGLLLTWESG QVLGDQTVSD NELQEMSNQG SKYVNKEIQN AVNGVKQIKT LIEKTNEERK 120
  121 TLLSNLEEAK KKKEDALNET RESETKLKEL PGVCNETMMA LWEECKPCLK QTCMKFYARV 180
  181 CRSGSGLVGR QLEEFLNQSS PFYFWMNGDR IDSLLENDRQ QTHMLDVMQD HFSRASSIID 240
  241 ELFQDRFFTR EPQDTYHYLP FSLPHRRPHF FFPKSRIVRS LMPFSPYEPL NFHAMFQPFL 300
  301 EMIHEAQQAM DIHFHSPAFQ HPPTEFIREG DDDRTVCREI RHNSTGCLRM KDQCDKCREI 360
  361 LSVDCSTNNP SQAKLRRELD ESLQVAERLT RKYNELLKSY QWKMLNTSSL LEQLNEQFNW 420
  421 VSRLANLTQG EDQYYLRVTT VASHTSDSDV PSGVTEVVVK LFDSDPITVT VPVEVSRKNP 480
  481 KFMETVAEKA LQEYRKKHRE E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] deduced N/A No confident structure predictions are available.
    2 View Details [74..129] MSA 3.01999 View MSA. No confident structure predictions are available.
    3 View Details [130..326] MSA 1.02894 View MSA. No confident structure predictions are available.
    4 View Details [327..501] MSA 2.030972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle