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Protein Overview: gi|41202595, gi|...

General Information:
Name(s) found: gi|56847616 [NCBI NR]
gi|41202595 [NCBI NR]
gi|223460190 [NCBI NR]
gi|205687475 [NCBI NR]
gi|187953409 [NCBI NR]
gi|123231632 [NCBI NR]
Description(s) found:
Found 41 descriptions.
SHOW ALL
  • gi|56847616|ref|NP_001007538.1| C1q and tumor necrosis factor related protein 9B [Homo sapiens] [NCBI NR]
  • ref|XP_370715.1| PREDICTED: similar to hypothetical protein MGC48915 [Homo sapiens] [NCBI NR]
  • gi|223460190|gb|AAI37007.1| Collagen triple helix repeat-containing [Homo sapiens] [NCBI NR]
  • gi|205687475|sp|B2RNN3.1|C1T9L_HUMAN RecName: Full=Complement C1q tumor necrosis factor-related protein 9-like; Flags: Precursor [NCBI NR]
  • gi|187953409|gb|AAI37005.1| Collagen triple helix repeat-containing [Homo sapiens] [NCBI NR]
  • gi|123231632|emb|CAM20042.1| novel protein containing a Collagen triple helix repeat (20 copies) [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIWWLLLAI EICTGNINSQ DTCRQGHPGI PGNPGHNGLP GRDGRDGAKG DKGDAGEPGC  60
   61 PGSPGKDGTS GEKGERGADG KVEAKGIKGD QGSRGSPGKH GPKGLAGPMG EKGLRGETGP 120
  121 QGQKGNKGDV GPTGPEGPRG NIGPLGPTGL PGPMGPIGKP GPKGEAGPTG PQGEPGVRGI 180
  181 RGWKGDRGEK GKIGETLVLP KSAFTVGLTV LSKFPSSDVP IKFDKILYNE FNHYDTAVGK 240
  241 FTCHIAGVYY FTYHITVFSR NVQVSLVKNG VKILHTRDAY VSSEDQASGS IVLQLKLGDE 300
  301 MWLQVTGGER FNGLFADEDD DTTFTGFLLF SSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 28.0 No description for 1y0fB was found.
    2 View Details [225..333] PSI-BLAST 52.221849 ACRP30 CALCIUM COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • receptor binding
    		•  3.37824597039547 bayes_pls_golite062009
  • tumor necrosis factor receptor superfamily binding
    		•  3.27382150819697 bayes_pls_golite062009
  • protein binding
    		•  2.25413201891408 bayes_pls_golite062009
  • binding
    		•  2.19044184419375 bayes_pls_golite062009
  • cytokine activity
    		•  2.15273244126886 bayes_pls_golite062009
  • cell surface binding
    		•  1.12145675554147 bayes_pls_golite062009
  • tumor necrosis factor receptor binding
    		•  0.83659914028185 bayes_pls_golite062009
  • CD40 receptor binding
    		•  0.817940383456736 bayes_pls_golite062009
  • eukaryotic cell surface binding
    		•  0.3981620493951 bayes_pls_golite062009
  • hormone activity
    		•  0.0434508002092211 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle