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Protein Overview: gi|5102630, gi|2...

General Information:
Name(s) found: gi|51173871 [NCBI NR]
gi|5102630 [NCBI NR]
gi|29788790 [NCBI NR]
Description(s) found:
Found 20 descriptions.
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  • gi|51173871|ref|NP_055065.1| high-mobility group protein 2-like 1 isoform a [Homo sapiens] [NCBI NR]
  • gi|5102630|emb|CAB45240.1| hypothetical protein [Homo sapiens] [NCBI NR]
  • gi|29788790|ref|NP_005478.2| high-mobility group protein 2-like 1 isoform a [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 492 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLKAITSP LAAGSKPSKK TGEKSSGSSS HSESKKEHHR KKVSGSSGEL PLEDGGSHKS  60
   61 KKMKPLYVNT ETLTLREPDG LKMKLILSPK EKGSSSVDEE SFQYPSQQAT VKKSSKKSAR 120
  121 DEQGALLLGH ELQSFLKTAR KKHKSSSDAH SSPGPEGCGS DASQFAESHS ANLDLSGLEP 180
  181 ILVESDSSSG GELEAGELVI DDSYREIKKK KKSKKSKKKK DKEKHKEKRH SKSKRSLGLS 240
  241 AVPVGEVTVT SGPPPSIPYA GAAAPPLPLP GLHTDGHSEK KKKKEEKDKE RERGEKPKKK 300
  301 NMSAYQVFCK EYRVTIVADH PGIDFGELSK KLAEVWKQLP EKDKLIWKQK AQYLQHKQNK 360
  361 AEATTVKRKA SSSEGSMKVK ASSVGVLSPQ KKSPPTTMLL PASPAKAPET EPIDVAAHLQ 420
  421 LLGESLSLIG HRLQETEGMV AVSGSLSVLL DSIICALGPL ACLTTQLPEL NGCPKQVLSN 480
  481 TLDNIAYIMP GL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 1.172995 View MSA. No confident structure predictions are available.
    2 View Details [188..283] deduced N/A No confident structure predictions are available.
    3 View Details [284..492] PSI-BLAST 27.69897 No description for 2gzkA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.927928103499335 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.38664561645052 bayes_pls_golite062009
  • DNA binding
    		•  0.37554038880732 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle