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Protein Overview: gi|21237808, gi|...

General Information:
Name(s) found: gi|21237808 [NCBI NR]
gi|119617314 [NCBI NR]
Description(s) found:
Found 19 descriptions.
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  • gi|21237808|ref|NP_620706.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b [Homo sapiens] [NCBI NR]
  • gi|119617314|gb|EAW96908.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, isoform CRA_b [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 1130 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ  60
   61 EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN 120
  121 VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDII KRHQGTVTED KNNASHVVYP 180
  181 VPGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK 240
  241 WILDTDTFNE WMNEEDYEVN DDKNPVSRRK KISAKTLTDE VNSPDSDRRD KKGGNYKKRK 300
  301 RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT 360
  361 VNTKKDSESA PVKGGTMTDL DEQEDESMET TGKDEDENST GNKGEQTKNP DLHEDNVTEQ 420
  421 THHIIIPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY 480
  481 LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG 540
  541 LVPLQPKTPQ GRQVDADTKA GRKGKELDDL VPETAKGKPE LQTSASQQML NFPDKGKEKP 600
  601 TDMQNFGLRT DMYTKKNVPS KSKAAASATR EWTEQETLLL LEALEMYKDD WNKVSEHVGS 660
  661 RTQDECILHF LRLPIEDPYL EDSEASLGPL AYQPIPFSQS GNPVMSTVAF LASVVDPRVA 720
  721 SAAAKSALEE FSKMKEEVPT ALVEAHVRKV EEAAKVTGKA DPAFGLESSG IAGTTSDEPE 780
  781 RIEESGNDEA RVEGQATDEK KEPKEPREGG GAIEEEAKEK TSEAPKKDEE KGKEGDSEKE 840
  841 SEKSDGDPIV DPEKEKEPKE GQEEVLKEVV ESEGERKTKV ERDIGEGNLS TAAAAALAAA 900
  901 AVKAKHLAAV EERKIKSLVA LLVETQMKKL EIKLRHFEEL ETIMDREREA LEYQRQQLLA 960
  961 DRQAFHMEQL KYAEMRARQQ HFQQMHQQQQ QPPPALPPGS QPIPPTGAAG PPAVHGLAVA1020
 1021 PASVVPAPAG SGAPPGSLGP SEQIGQAGST AGPQQQQPAG APQPGAVPPG VPPPGPHGPS1080
 1081 PFPNQQTPPS MMPGAVPGSG HPGVADPGTP LPPDPTAPSP GTVTPVPPPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] deduced N/A No confident structure predictions are available.
    2 View Details [223..400] deduced N/A No confident structure predictions are available.
    3 View Details [401..517] PSI-BLAST 38.0 Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes
    4 View Details [518..737] FFAS03 3.37 No description for 2iw5B was found.
    5 View Details [738..1130] PSI-BLAST 26.522879 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle