| Protein: | gi|21237808, gi|... |
| Organism: | Homo sapiens |
| Length: | 1130 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21237808, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1119] | [1..1119] |
|
|
0.0 | [1..1119] | [1..1119] |
|
|
0.0 | [1..1119] | [1..1119] |
|
|
0.0 | [1..1109] | [1..1109] |
|
|
0.0 | [1..1119] | [1..1124] |
|
|
0.0 | [33..1128] | [47..1149] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ 60
61 EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN 120
121 VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDII KRHQGTVTED KNNASHVVYP 180
181 VPGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [223-400] |
1 11 21 31 41 51
| | | | | |
1 ASVEDAPTPE KPRKVHAKWI LDTDTFNEWM NEEDYEVNDD KNPVSRRKKI SAKTLTDEVN 60
61 SPDSDRRDKK GGNYKKRKRS PSPSPTPEAK KKNAKKGPST PYTKSKRGHR EEEQEDLTKD 120
121 MDEPSPVPNV EEVTLPKTVN TKKDSESAPV KGGTMTDLDE QEDESMETTG KDEDENST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [401-517] |
1 11 21 31 41 51
| | | | | |
1 GNKGEQTKNP DLHEDNVTEQ THHIIIPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE 60
61 IYLAYRNFMI DTYRLNPQEY LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAE
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 2fq3A |
| Description: | Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [518-737] |
1 11 21 31 41 51
| | | | | |
1 SRPTPMGPPP TSHFHVLADT PSGLVPLQPK TPQGRQVDAD TKAGRKGKEL DDLVPETAKG 60
61 KPELQTSASQ QMLNFPDKGK EKPTDMQNFG LRTDMYTKKN VPSKSKAAAS ATREWTEQET 120
121 LLLLEALEMY KDDWNKVSEH VGSRTQDECI LHFLRLPIED PYLEDSEASL GPLAYQPIPF 180
181 SQSGNPVMST VAFLASVVDP RVASAAAKSA LEEFSKMKEE
|
| Detection Method: | |
| Confidence: | 3.37 |
| Match: | 2iw5B |
| Description: | No description for 2iw5B was found. |
|
Region A: Residues: [738-1130] |
1 11 21 31 41 51
| | | | | |
1 VPTALVEAHV RKVEEAAKVT GKADPAFGLE SSGIAGTTSD EPERIEESGN DEARVEGQAT 60
61 DEKKEPKEPR EGGGAIEEEA KEKTSEAPKK DEEKGKEGDS EKESEKSDGD PIVDPEKEKE 120
121 PKEGQEEVLK EVVESEGERK TKVERDIGEG NLSTAAAAAL AAAAVKAKHL AAVEERKIKS 180
181 LVALLVETQM KKLEIKLRHF EELETIMDRE REALEYQRQQ LLADRQAFHM EQLKYAEMRA 240
241 RQQHFQQMHQ QQQQPPPALP PGSQPIPPTG AAGPPAVHGL AVAPASVVPA PAGSGAPPGS 300
301 LGPSEQIGQA GSTAGPQQQQ PAGAPQPGAV PPGVPPPGPH GPSPFPNQQT PPSMMPGAVP 360
361 GSGHPGVADP GTPLPPDPTA PSPGTVTPVP PPQ
|
| Detection Method: | |
| Confidence: | 26.522879 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
