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Protein Overview: gi|26638662, gi|...

General Information:
Name(s) found: gi|60459550 [NCBI NR]
gi|26638662 [NCBI NR]
gi|119623925 [NCBI NR]
gi|119623915 [NCBI NR]
gi|119623912 [NCBI NR]
Description(s) found:
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  • gi|60459550|gb|AAX20111.1| mutS homolog 5 (E. coli) [Homo sapiens] [NCBI NR]
  • gi|26638662|ref|NP_079535.3| mutS homolog 5 isoform a [Homo sapiens] [NCBI NR]
  • gi|119623925|gb|EAX03520.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119623915|gb|EAX03510.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119623912|gb|EAX03507.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens] [NCBI NR]
  • mutS homolog 5 isoform a [HMR_022704.fasta]
  • mutS homolog 5 isoform a; mutS (E. coli) homolog 5 [071204_hmrz_cont.fasta]
  • mutS homolog 5 isoform a [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Splice Isoform 3 of MutS protein homolog 5 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • Tax_Id=9606 MutS homolog 5 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • mutS homolog 5 isoform a; mutS (E. coli) homolog 5 [Homo sapiens] [HumanGallus06162005.fasta]
  • mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • mutS homolog 5 (E. coli) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 3 of MutS protein homolog 5 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=MSH5 Isoform 3 of MutS protein homolog 5 [human-ipi-250309-contam.fasta]
  • IPI:IPI00297780.4|SWISS-PROT:O43196-3|TREMBL:B0UXD6;Q9UMP2|ENSEMBL:ENSP00000364894;ENSP00000415811|REFSEQ:NP_079535|VEGA:OTTHUMP00000194953 Tax_Id=9606 Gene_Symbol=MSH5 Isoform 3 of MutS protein homolog 5 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=MSH5 Isoform 3 of MutS protein homolog 5 ENSG00000096474 IPI00019313 IPI00790547 IPI00514680 IPI00297780 [drosphohumanreversed.fasta]
  • Isoform 3 of MutS protein homolog 5 OS=Homo sapiens GN=MSH5 [011711_HMR.fasta]
  • IPI:IPI00297780.4|SWISS-PROT:O43196-3|TREMBL:Q9UMP2|ENSEMBL:ENSP00000364894;ENSP00000417871 Tax_Id=9606 Gene_Symbol=MSH5 Isoform 3 of MutS protein homolog 5 [ipi.HUMAN.fasta.20100406]
  • IPI:IPI00297780.4|SWISS-PROT:O43196-3|TREMBL:Q9UMP2|ENSEMBL:ENSP00000364894;ENSP00000417871;ENSP00000432228;ENSP00000436555|VEGA:OTTHUMP00000233362;OTTHUMP00000233875;OTTHUMP00000236429 Tax_Id=9606 Gene_Symbol=MSH5;MSH5-C6orf26 Isoform 3 of MutS protein homolog 5 [ipi.HUMAN.20110912.fasta]
  • Isoform 3 of MutS protein homolog 5 GN=MSH5 [Doctor+uniprot-HUMAN-120911.fasta]
  • Tax_Id=9606 Gene_Symbol=MSH5-C6orf26;MSH5 Isoform 3 of MutS protein homolog 5 [human-ipi-270911-contam-BSA.fasta]
  • IPI:IPI00297780.4|SWISS-PROT:O43196-3|TREMBL:Q9UMP2|ENSEMBL:ENSP00000364894;ENSP00000417871;ENSP00000431693;ENSP00000436555;ENSP00000450536|VEGA:OTTHUMP00000233362;OTTHUMP00000236429 Tax_Id=9606 Gene_Symbol=MSH5-C6orf26;MSH5 Isoform 3 of MutS protein homolog 5 [ipi.HUMAN.fasta.20110927]
  • MutS homolog 5 (E. coli), isoform CRA_b OS=Homo sapiens GN=MSH5 PE=3 SV=1 [uniprot-human-031015-contam.fasta]
  • Isoform of O43196, MutS homolog 5 (E. coli), isoform CRA_b OS=Homo sapiens GN=MSH5 PE=1 SV=1 [2016-04-human-contam-aPKC-His-Par6.fasta]
  • Isoform of O43196, Isoform 3 of MutS protein homolog 5 OS=Homo sapiens GN=MSH5 [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 851 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGANPRR TPQGPRPGAA SSGFPSPAPV PGPREAEEEE VEEEEELAEI HLCVLWNSGY  60
   61 LGIAYYDTSD STIHFMPDAP DHESLKLLQR VLDEINPQSV VTSAKQDENM TRFLGKLASQ 120
  121 EHREPKRPEI IFLPSVDFGL EISKQRLLSG NYSFIPDAMT ATEKILFLSS IIPFDCLLTP 180
  181 PGDLRFTPIP LLIPSQVRAL GGLLKFLGRR RIGVELEDYN VSVPILGFKK FMLTHLVNID 240
  241 QDTYSVLQIF KSESHPSVYK VASGLKEGLS LFGILNRCHC KWGEKLLRLW FTRPTHDLGE 300
  301 LSSRLDVIQF FLLPQNLDMA QMLHRLLGHI KNVPLILKRM KLSHTKVSDW QVLYKTVYSA 360
  361 LGLRDACRSL PQSIQLFRDI AQEFSDDLHH IASLIGKVVD FEGSLAENRF TVLPNIDPEI 420
  421 DEKKRRLMGL PSFLTEVARK ELENLDSRIP SCSVIYIPLI GFLLSIPRLP SMVEASDFEI 480
  481 NGLDFMFLSE EKLHYRSART KELDALLGDL HCEIRDQETL LMYQLQCQVL ARAAVLTRVL 540
  541 DLASRLDVLL ALASAARDYG YSRPRYSPQV LGVRIQNGRH PLMELCARTF VPNSTECGGD 600
  601 KGRVKVITGP NSSGKSIYLK QVGLITFMAL VGSFVPAEEA EIGAVDAIFT RIHSCESISL 660
  661 GLSTFMIDLN QVAKAVNNAT AQSLVLIDEF GKGTNTVDGL ALLAAVLRHW LARGPTCPHI 720
  721 FVATNFLSLV QLQLLPQGPL VQYLTMETCE DGNDLVFFYQ VCEGVAKASH ASHTAAQAGL 780
  781 PDKLVARGKE VSDLIRSGKP IKPVKDLLKK NQMENCQTLV DKFMKLDLED PNLDLNVFMS 840
  841 QEVLPAATSI L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..851] PSI-BLAST 161.0 Crystal Structure of E. coli DNA Mismatch Repair enzyme MutS, E38T mutant, in complex with a G.T mismatch


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle