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Protein Overview: PRPH

General Information:
Name(s) found: PRPH [HGNC (HUGO)]
Description(s) found:
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  • gi|21595822|gb|AAH32703.1| Peripherin [Homo sapiens] [NCBI NR]
  • gi|21264345|ref|NP_006253.2| peripherin [Homo sapiens] [NCBI NR]
  • gi|119578465|gb|EAW58061.1| peripherin, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|118585871|sp|P41219.2|PERI_HUMAN RecName: Full=Peripherin [NCBI NR]
  • peripherin [HGNC (HUGO)]
  • Peripherin OS=Homo sapiens GN=PRPH PE=1 SV=2 [Swiss-Prot]
  • peripherin; neurofilament 4 (57kD) [HMR_022704.fasta]
  • peripherin [Homo sapiens]gi|21595822|gb|AAH32703.1| Peripherin [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • (NM_006262) peripherin; neurofilament 4 (57kD) [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • peripherin [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • peripherin; neurofilament 4 (57kD) [Homo sapiens] [HumanGallus06162005.fasta]
  • Peripherin [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • peripherin, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Peripherin [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 1 of Peripherin [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=PRPH Isoform 1 of Peripherin [human-ipi-250309-contam.fasta]
  • IPI:IPI00013164.4|SWISS-PROT:P41219-1|ENSEMBL:ENSP00000257860|REFSEQ:NP_006253|H-INV:HIT000289438|VEGA:OTTHUMP00000167332 Tax_Id=9606 Gene_Symbol=PRPH Isoform 1 of Peripherin [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • P41219;Q8N577; RecName: Full=Peripherin; AltName: Full=Neurofilament 4; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of Peripherin OS=Homo sapiens GN=PRPH [011711_HMR.fasta]
  • GeneSymbol=PRPH Synonyms=NEF4|PRPH1 peripherin [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00013164.4|SWISS-PROT:P41219-1|TREMBL:B3KWQ6|ENSEMBL:ENSP00000257860|REFSEQ:NP_006253|H-INV:HIT000289438|VEGA:OTTHUMP00000235301 Tax_Id=9606 Gene_Symbol=PRPH Isoform 1 of Peripherin [ipi.HUMAN.20110912.fasta]
  • Peripherin GN=PRPH [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHHPSGLRA GFSSTSYRRT FGPPPSLSPG AFSYSSSSRF SSSRLLGSAS PSSSVRLGSF  60
   61 RSPRAGAGAL LRLPSERLDF SMAEALNQEF LATRSNEKQE LQELNDRFAN FIEKVRFLEQ 120
  121 QNAALRGELS QARGQEPARA DQLCQQELRE LRRELELLGR ERDRVQVERD GLAEDLAALK 180
  181 QRLEEETRKR EDAEHNLVLF RKDVDDATLS RLELERKIES LMDEIEFLKK LHEEELRDLQ 240
  241 VSVESQQVQQ VEVEATVKPE LTAALRDIRA QYESIAAKNL QEAEEWYKSK YADLSDAANR 300
  301 NHEALRQAKQ EMNESRRQIQ SLTCEVDGLR GTNEALLRQL RELEEQFALE AGGYQAGAAR 360
  361 LEEELRQLKE EMARHLREYQ ELLNVKMALD IEIATYRKLL EGEESRISVP VHSFASLNIK 420
  421 TTVPEVEPPQ DSHSRKTVLI KTIETRNGEV VTESQKEQRS ELDKSSAHSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] Pfam 4.958607 No description for PF04732.5 was found. No confident structure predictions are available.
    2 View Details [69..334] FFAS03 2.01 No description for 2i1jA was found.
    3 View Details [335..470] PSI-BLAST 6.30103 Vimentin coil


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle