| Protein: | PRPH |
| Organism: | Homo sapiens |
| Length: | 470 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRPH.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-71 | [1..410] | [149..569] |
|
|
2.0E-66 | [3..409] | [49..478] |
|
|
1.0E-65 | [5..409] | [109..515] |
|
|
5.0E-65 | [1..410] | [1..421] |
|
|
1.0E-63 | [3..409] | [47..476] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MSHHPSGLRA GFSSTSYRRT FGPPPSLSPG AFSYSSSSRF SSSRLLGSAS PSSSVRLGSF 60
61 RSPRAGAG
|
| Detection Method: |  |
| Confidence: | 4.958607 |
| Match: | PF04732.5 |
| Description: | No description for PF04732.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-334] |
1 11 21 31 41 51
| | | | | |
1 ALLRLPSERL DFSMAEALNQ EFLATRSNEK QELQELNDRF ANFIEKVRFL EQQNAALRGE 60
61 LSQARGQEPA RADQLCQQEL RELRRELELL GRERDRVQVE RDGLAEDLAA LKQRLEEETR 120
121 KREDAEHNLV LFRKDVDDAT LSRLELERKI ESLMDEIEFL KKLHEEELRD LQVSVESQQV 180
181 QQVEVEATVK PELTAALRDI RAQYESIAAK NLQEAEEWYK SKYADLSDAA NRNHEALRQA 240
241 KQEMNESRRQ IQSLTCEVDG LRGTNE
|
| Detection Method: | |
| Confidence: | 2.01 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [335-470] |
1 11 21 31 41 51
| | | | | |
1 ALLRQLRELE EQFALEAGGY QAGAARLEEE LRQLKEEMAR HLREYQELLN VKMALDIEIA 60
61 TYRKLLEGEE SRISVPVHSF ASLNIKTTVP EVEPPQDSHS RKTVLIKTIE TRNGEVVTES 120
121 QKEQRSELDK SSAHSY
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1gk4A |
| Description: | Vimentin coil |
Matching Structure (courtesy of the PDB): |
|
