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Protein Overview: YJDL_ECOLI

General Information:
Name(s) found: YJDL_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|731995|sp|P39276.1|YJDL_ECOLI RecName: Full=Inner membrane transporter yjdL [NCBI NR]
  • gi|536975|gb|AAA97030.1| ORF_f485 [Escherichia coli] [NCBI NR]
  • pir||S56359 probable proton/oligopeptide symporter yjdL - Escherichia coli (strain K-12) [NCBI NR]
  • Inner membrane transporter yjdL - Escherichia coli [Swiss-Prot]
  • putative di-/tripeptide transport protein (POT family); putative peptide transporter [Escherichia coli K12]gi|1790572|gb|AAC77091.1| putative peptide transporter; putative di-/tripeptide transport protein (POT family) [Escherichia coli K12]gi|536975|gb| [nrdb_11152004_Chlamydomonas]
  • Inner membrane transporter yjdL [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • ORF_f485 [Escherichia coli] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Probable dipeptide and tripeptide permease YjdL OS=Escherichia coli (strain K12) GN=yjdL PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Dipeptide and tripeptide permease C OS=Escherichia coli (strain K12) GN=dtpC PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 485 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPSQPRAI YYIVAIQIWE YFSFYGMRAL LILYLTHQLG FDDNHAISLF SAYASLVYVT  60
   61 PILGGWLADR LLGNRTAVIA GALLMTLGHV VLGIDTNSTF SLYLALAIII CGYGLFKSNI 120
  121 SCLLGELYDE NDHRRDGGFS LLYAAGNIGS IAAPIACGLA AQWYGWHVGF ALAGGGMFIG 180
  181 LLIFLSGHRH FQSTRSMDKK ALTSVKFALP VWSWLVVMLC LAPVFFTLLL ENDWSGYLLA 240
  241 IVCLIAAQII ARMMIKFPEH RRALWQIVLL MFVGTLFWVL AQQGGSTISL FIDRFVNRQA 300
  301 FNIEVPTALF QSVNAIAVML AGVVLAWLAS PESRGNSTLR VWLKFAFGLL LMACGFMLLA 360
  361 FDARHAAADG QASMGVMISG LALMGFAELF IDPVAIAQIT RLKMSGVLTG IYMLATGAVA 420
  421 NWLAGVVAQQ TTESQISGMA IAAYQRFFSQ MGEWTLACVA IIVVLAFATR FLFSTPTNMI 480
  481 QESND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..485] PSI-BLAST 15.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle