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Protein Overview: YIBA_ECOLI

General Information:
Name(s) found: YIBA_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|83288080|sp|P0ADK6.1|YIBA_ECOLI RecName: Full=Protein yibA [NCBI NR]
  • gi|466732|gb|AAB18571.1| alternate name ORF2 of rhsA locus [Escherichia coli str. K-12 substr. MG1655] [NCBI NR]
  • gi|304935|gb|AAC95066.1| unknown [Escherichia coli] [NCBI NR]
  • pir||F86034 hypothetical protein yibA [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||S47815 hypothetical 31.8K protein (rhsA-mtlA intergenic region) - Escherichia coli (strain K-12) [NCBI NR]
  • Protein yibA - Escherichia coli [Swiss-Prot]
  • hypothetical protein; putative lyase [Escherichia coli K12]gi|15804135|ref|NP_290174.1| hypothetical protein Z5015 [Escherichia coli O157:H7 EDL933]gi|304935|gb|AAC95066.1| unknown [Escherichia coli]gi|1790021|gb|AAC76618.1| orf, hypothetical protein; [nrdb_11152004_Chlamydomonas]
  • Protein yibA [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • alternate name ORF2 of rhsA locus [Escherichia coli] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • unknown [Escherichia coli] [nr-271106-contam.fasta]
  • Protein yibA OS=Escherichia coli (strain K12) GN=yibA PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Protein YibA OS=Escherichia coli (strain K12) GN=yibA PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTYQKRKA SKEYGLYNQC KKLNDDELFR LLDDHNSLKR ISSARVLQLR GGQDAVRLAI  60
   61 EFCSDKNYIR RDIGAFILGQ IKICKKCEDN VFNILNNMAL NDKSACVRAT AIESTAQRCK 120
  121 KNPIYSPKIV EQSQITAFDK STNVRRATAF AISVINDKAT IPLLINLLKD PNGDVRNWAA 180
  181 FAININKYDN SDIRDCFVEM LQDKNEEVRI EAIIGLSYRK DKRVLSVLCD ELKKNTVYDD 240
  241 IIEAAGELGD KTLLPVLDTM LYKFDDNEII TSAIDKLKRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] PSI-BLAST 37.09691 X-RAY STRUCTURE OF YIBA_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ET31.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle