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Protein Overview: YDCM_ECOLI

General Information:
Name(s) found: YDCM_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||C64895 hypothetical protein b1432 - Escherichia coli (strain K-12) [NCBI NR]
  • gi|20140523|sp|P76102.1|YDCM_ECOLI RecName: Full=Uncharacterized protein ydcM [NCBI NR]
  • Hypothetical protein ydcM - Escherichia coli [Swiss-Prot]
  • hypothetical protein; putative transposase [Escherichia coli K12]gi|1787702|gb|AAC74514.1| orf, hypothetical protein; putative transposase [Escherichia coli K12]gi|7449753|pir||C64895 hypothetical protein b1432 - Escherichia coli (strain K-12)gi|201405 [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein ydcM [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
    • Organism: Escherichia coli
    Length: 402 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLQAFKFQ LRPGGQQECE MRRFAGACRF VFNRALARQN ENHEAGNKYI PYGKMASWLV  60
   61 EWKNATETQW LKDSPSQPLQ QSLKDLERAY KNFFRKRAAF PRFKKRGQND AFRYPQGVKL 120
  121 DQENSRIFLP KLGWMRYRNS RQVTGVVKNV TVSQSCGKWY ISIQTESEVS TPVHPSASMV 180
  181 GLDAGVAKLA TLSDGTVFEP VNSFQKNQKK LARLQRQLSR KVKFSNNWQK QKRKIQRLHS 240
  241 CIANIRRDYL HKVTTAVSKN HAMIVIEDLK VSNMSKSAAG TVSQPGRNVR AKSGLNRSIL 300
  301 DQGWYEMRRQ LAYKQLWRGG QVLAVPPAYT SQRCAYCGHT AKENRLSQSK FRCQVCGYTA 360
  361 NADVNGARNI LAAGHAVLAC GEMVQSGRPL KQEPTEMIQA TA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] MSA 18.415997 View MSA. No confident structure predictions are available.
    2 View Details [110..286] MSA 6.507997 View MSA. No confident structure predictions are available.
    3 View Details [287..402] Pfam 32.69897 No description for PF07282.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle