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Protein Overview: YCGF_ECOLI

General Information:
Name(s) found: YCGF_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||H64861 hypothetical protein b1163 - Escherichia coli (strain K-12) [NCBI NR]
  • gi|13634045|sp|P75990.1|YCGF_ECOLI RecName: Full=Uncharacterized protein ycgF [NCBI NR]
  • Hypothetical protein ycgF - Escherichia coli [Swiss-Prot]
  • hypothetical protein b1163 [Escherichia coli K12]gi|1787410|gb|AAC74247.1| orf, hypothetical protein; conserved protein [Escherichia coli K12]gi|4062748|dbj|BAA36002.1| Hypothetical protein 1 (ntrC 3' region) [Escherichia coli K12]gi|4062744|dbj|BAA359 [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein ycgF [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Blue light- and temperature-regulated antirepressor YcgF OS=Escherichia coli (strain K12) GN=ycgF PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Blue light- and temperature-regulated antirepressor BluF OS=Escherichia coli (strain K12) GN=bluF PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTLIYRSH IRDDEPVKKI EEMVSIANRR NMQSDVTGIL LFNGSHFFQL LEGPEEQVKM  60
   61 IYRAICQDPR HYNIVELLCD YAPARRFGKA GMELFDLRLH ERDDVLQAVF DKGTSKFQLT 120
  121 YDDRALQFFR TFVLATEQST YFEIPAEDSW LFIADGSDKE LDSCALSPTI NDHFAFHPIV 180
  181 DPLSRRIIAF EAIVQKNEDS PSAIAVGQRK DGEIYTADLK SKALAFTMAH ALELGDKMIS 240
  241 INLLPMTLVN EPDAVSFLLN EIKANALVPE QIIVEFTESE VISRFDEFAE AIKSLKAAGI 300
  301 SVAIDHFGAG FAGLLLLSRF QPDRIKISQE LITNVHKSGP RQAIIQAIIK CCTSLEIQVS 360
  361 AMGVATPEEW MWLESAGIEM FQGDLFAKAK LNGIPSIAWP EKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 18.09691 Response regulator PleD in complex with c-diGMP
    2 View Details [122..403] PSI-BLAST 73.0 No description for 2r6oA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  0.899732139081553 bayes_pls_golite062009
  • signal transducer activity
    		•  0.895509686942211 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.895509686942211 bayes_pls_golite062009
  • binding
    		•  0.145546551776301 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle