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Protein Overview: YBIP_ECOLI

General Information:
Name(s) found: YBIP_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||G64818 probable membrane protein ybiP - Escherichia coli (strain K-12) [NCBI NR]
  • gi|2495577|sp|P75785.1|YBIP_ECOLI RecName: Full=UPF0141 inner membrane protein ybiP [NCBI NR]
  • UPF0141 inner membrane protein ybiP - Escherichia coli [Swiss-Prot]
  • putative enzyme; putative transmembrane protein [Escherichia coli K12]gi|1787035|gb|AAC73902.1| putative enzyme; putative transmembrane protein [Escherichia coli K12]gi|4062383|dbj|BAA35497.1| Hypothetical protein HI1005 [Escherichia coli K12]gi|406237 [nrdb_11152004_Chlamydomonas]
  • UPF0141 inner membrane protein ybiP [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Putative phosphoethanolamine transferase ybiP OS=Escherichia coli (strain K12) GN=ybiP PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTLKESLV TRSRVFSPWT AFYFLQSLLI NLGLGYPFSL LYTAAFTAIL LLLWRTLPRV  60
   61 QKVLVGVSSL VAACYFPFAQ AYGAPNFNTL LALHSTNMEE STEILTIFPW YSYLVGLFIF 120
  121 ALGVIAIRRK KENEKARWNT FDSLCLVFSV ATFFVAPVQN LAWGGVFKLK DTGYPVFRFA 180
  181 KDVIVNNNEV IEEQERMAKL SGMKDTWTVT AVKPKYQTYV VVIGESARRD ALGAFGGHWD 240
  241 NTPFASSVNG LIFADYIAAS GSTQKSLGLT LNRVVDGKPQ FQDNFVTLAN RAGFQTWWFS 300
  301 NQGQIGEYDT AIASIAKRAD EVYFLKEGNF EADKNTKDEA LLDMTAQVLA QEHSQPQLIV 360
  361 LHLMGSHPQA CDRTQGKYET FVQSKETSCY LYTMTQTDDL LRKLYDQLRN SGSSFSLVYF 420
  421 SDHGLAFKER GKDVQYLAHD DKYQQNFQVP FMVISSDDKA HRVIKARRSA NDFLGFFSQW 480
  481 TGIKAKEINI KYPFISEKKA GPIYITNFQL QKVDYNHLGT DIFDPKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] MSA 2.454997 View MSA. No confident structure predictions are available.
    2 View Details [214..527] PSI-BLAST 48.09691 Arylsulfatase A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.78323101437723 bayes_pls_golite062009
  • hydrolase activity
    		•  1.33940320180164 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.17808563980987 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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