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Protein Overview: YBDN_ECOLI

General Information:
Name(s) found: YBDN_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||H64793 ybdN protein - Escherichia coli (strain K-12) [NCBI NR]
  • gi|3024984|sp|P77216.1|YBDN_ECOLI RecName: Full=Uncharacterized protein ybdN [NCBI NR]
  • gi|1778520|gb|AAB40803.1| hypothetical protein [Escherichia coli] [NCBI NR]
  • Hypothetical protein ybdN - Escherichia coli [Swiss-Prot]
  • hypothetical protein b0602 [Escherichia coli K12]gi|1786818|gb|AAC73703.1| orf, hypothetical protein; conserved hypothetical protein [Escherichia coli K12]gi|4062219|dbj|BAA35232.1| unnamed protein product [Escherichia coli K12]gi|1778520|gb|AAB40803.1 [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein ybdN [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • hypothetical protein [Escherichia coli] [nr-271106-contam.fasta]
  • Uncharacterized protein ybdN OS=Escherichia coli (strain K12) GN=ybdN PE=4 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Uncharacterized protein YbdN OS=Escherichia coli (strain K12) GN=ybdN PE=4 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIYKIPLPL NILEAARERI TWTLNTLPRV CVSFSGGKDS GLMLHLTAEL ARQMGKKICV  60
   61 LFIDWEAQFS CTINYVQSLR ELYTDVIEEF YWVALPLTTQ NSLSQYQPEW QCWEPDVEWV 120
  121 RQPPQDAITD PDFFCFYQPG MTFEQFVREF AEWFSQKRPA AMMIGIRADE SYNRFVAIAS 180
  181 LNKQRFADDK PWTTAAPGGH SWYIYPIYDW KVADIWTWYA NHQSLCNPLY NLMYQAGVPL 240
  241 RHMRICEPFG PEQRQGLWLY HVIEPDRWAA MCARVSGVKS GGIYAGHDNH FYGHRKILKP 300
  301 EHLDWQEYAL LLLNSMPEKT AEHYRNKIAI YLHWYQKKGI EVPQTQQGDI GAKDIPSWRR 360
  361 ICKVLLNNDY WCRALSFSPT KSKNYQRYNE RIKGKRQEWG ILCNND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 62.69897 Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.062439821475123 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle