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Protein Overview: Y2090_ARATH

General Information:
Name(s) found: Y2090_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|51970216|dbj|BAD43800.1| ABC transporter like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|51969458|dbj|BAD43421.1| ABC transporter like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|49066033|sp|O04212.2|Y2090_ARATH RecName: Full=Putative ABC1 protein At2g40090; Flags: Precursor [NCBI NR]
  • gi|18405261|ref|NP_565923.1| ATATH9; transporter [Arabidopsis thaliana] [NCBI NR]
  • (O04212) Putative ABC1 protein At2g40090 precursor [Swiss-Prot]
  • Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana GN=At2g40090 PE=2 SV=2 [Swiss-Prot]
  • ABC transporter like protein [Arabidopsis thaliana]gi|51969458|dbj|BAD43421.1| ABC transporter like protein [Arabidopsis thaliana]gi|49066033|sp|O04212|Y290_ARATH Putative ABC1 protein At2g40090 precursorgi|18405261|ref|NP_565923.1| ABC1 family protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative ABC1 protein At2g40090 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATATH9 | ATATH9 (ABC2 homolog 9) | chr2:16744763-16747381 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATATH9 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ABC transporter like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative ABC1 protein At2g40090 precursor [nr-271106-contam.fasta]
  • | Symbols: ATATH9, ATH9 | ABC2 homolog 9 | chr2:16737685-16740303 REVERSE LENGTH=538 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSLWRTR TKLLVVGTAL CGGSGAAFIA SSDDPSTTLK LCTSIPVRLY RNTVTAASIA  60
   61 FDYEYSLLGL AEGSSERAKV KHEVHLRSAQ KLQELCFKNG GIYIKLGQHI GQLEYLVPEE 120
  121 YVRTMRESML NKCPISSYEQ VCEVFKKEVG EMPDQVFAEF DPVPIASASL AQVHVARTHD 180
  181 GKKVAVKVQH AHMTDTAAAD TAAVGVLVNT LHRIFPSFDY RWLLDEMSES LPKELDFLVE 240
  241 AKNNEKCLDN FRKLSPHIAE YVYAPTIYWN LSTSKLLTME FMDGAQVNDV DKIRKLGIQP 300
  301 YEVSKLVSQT FAEMMFKHGF VHCDPHAANL IVRPDPSGKR NIYGKRKPQL VILDHGLYKE 360
  361 LDFNTRFNYA SLWKALVFSD AKAIKEHSEK LGAGDDLYVL FAGILTMRPW KQVIDTSVDH 420
  421 LVIQGNKEDV SELQMYASQY FSEISELLRR LPRVILLMLK TNDCLRSVNN ELMQGSSLES 480
  481 FLIIGKVSSQ AVLEAKRAEK KSLMKWLKVW FEGFSVEARL WVMQFALWIL QVRKSLTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] deduced N/A No confident structure predictions are available.
    2 View Details [134..538] PSI-BLAST 43.0 MAP kinase p38-gamma

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • protein kinase activity
    		•  2.78878187773119 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.65696220652782 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  2.52043782881479 bayes_pls_golite062009
  • kinase activity
    		•  2.45757516485965 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.08265655536291 bayes_pls_golite062009
  • binding
    		•  1.72646207655432 bayes_pls_golite062009
  • catalytic activity
    		•  1.21655087018101 bayes_pls_golite062009
  • transferase activity
    		•  1.09650209608069 bayes_pls_golite062009
  • ATP binding
    		•  0.57612786382221 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.533622009869642 bayes_pls_golite062009
  • protein binding
    		•  0.529222066176906 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.516315256680509 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.366733507123411 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.366674148714169 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.355425813353478 bayes_pls_golite062009
  • nucleotide binding
    		•  0.350202706382045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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