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Protein Overview: XDHA_ECOLI

General Information:
Name(s) found: XDHA_ECOLI [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Xanthine dehydrogenase molybdenum-binding subunit (EC 1.17.1.4) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 752 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVDAIAKVT GRARYTDDYV MAGMCYAKYV RSPIAHGYAV SINDEQARSL PGVLAIFTWE  60
   61 DVPDIPFATA GHAWTLDENK RDTADRALLT RHVRHHGDAV AIVVARDELT AEKAAQLVSI 120
  121 EWQELPVITT PEAALAEDAA PIHNGGNLLK QSTMSTGNVQ QTIDAADYQV QGHYQTPVIQ 180
  181 HCHMESVTSL AWMEDDSRIT IVSSTQIPHI VRRVVGQALD IPWSCVRVIK PFVGGGFGNK 240
  241 QDVLEEPMAA FLTSKLGGIP VKVSLSREEC FLATRTRHAF TIDGQMGVNR DGTLKGYSLD 300
  301 VLSNTGAYAS HGHSIASAGG NKVAYLYPRC AYAYSSKTCY TNLPSAGAMR GYGAPQVVFA 360
  361 VESMLDDAAT ALGIDPVEIR LRNAAREGDA NPLTGKRIYS AGLPECLEKG RKIFEWEKRR 420
  421 AECQNQQGNL RRGVGVACFS YTSNTWPVGV EIAGARLLMN QDGTINVQSG ATEIGQGADT 480
  481 VFSQMVAETV GVPVSDVRVI STQDTDVTPF DPGAFASRQS YVAAPALRSA ALLLKEKIIA 540
  541 HAAVMLHQSA MNLTLIKGHI VLVERPEEPL MSLKDLAMDA FYHPERGGQL SAESSIKTTT 600
  601 NPPAFGCTFV DLTVDIALCK VTINRILNVH DSGHILNPLL AEGQVHGGMG MGIGWALFEE 660
  661 MIIDAKSGVV RNPNLLDYKM PTMPDLPQLE SAFVEINEPQ SAYGHKSLGE PPIIPVAAAI 720
  721 RNAVKMATGV AINTLPLTPK RLYEEFHLAG LI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..752] PSI-BLAST 1000.0 Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain; Carbon monoxide (CO) dehydrogenase molybdoprotein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • xanthine dehydrogenase activity
    		•  5.82918526117689 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
    		•  5.67527300272858 bayes_pls_golite062009
  • catalytic activity
    		•  2.08712526567445 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  1.80290092537495 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.43578190064474 bayes_pls_golite062009
  • molybdenum ion binding
    		•  0.959122327793141 bayes_pls_golite062009
  • molybdopterin cofactor binding
    		•  0.63131279827553 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle