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Protein Overview: SYSC_ARATH

General Information:
Name(s) found: SYSC_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Serine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: cytosol [ISS]
    Biological Process: response to cadmium ion [IEP]
    seryl-tRNA aminoacylation [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    aminoacyl-tRNA ligase activity [IEA]
    serine-tRNA ligase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDINLFREE KGNNPEIIRE SQRRRFASVE IVDEIIKLDK EWRQRQFEVD SFRKEFNKLN  60
   61 KQVAQLKIKK EDASEIIQQT EKNKQDSTAK EAEVREAYAA LKAKLEQVGN LVHDSVPVDK 120
  121 DEANNLVIKL WGEKRFSTPG LKLKNHVDLV ELLGIADTKR GAEIAGARGF FLKGDGLMLN 180
  181 QALINFGLTF LKKRGFTGLQ PPFFMRKDVM AKCAQLAQFD EELYKVTGEG DDKYLIATAE 240
  241 QPLCAYHIDE WIHPTELPLR YAGYSSCFRK EAGSHGRDTL GIFRVHQFEK IEQFCITGPN 300
  301 ENASWEMLDE MMKNSEDFYQ ALKLPYQIVS IVSGALNDAA AKKYDLEAWF PSSETFRELV 360
  361 SCSNCTDYQA RRLEIRYGQK KSNEQTKQYV HMLNSTLTAT ERTICCILEN YQREDGVDIP 420
  421 EVLQPFMGGE TFLPFKAKPV VADTKGKKSK A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..451] PSI-BLAST 116.0 No description for 2dq3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle