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View Structure Prediction Details

Protein: SYSC_ARATH
Organism: Arabidopsis thaliana
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYSC_ARATH.

Description E-value Query
Range
Subject
Range
gi|25293165 - pir||D97918 serine-tRNA ligase (EC 6.1.1.11) [imported] - Streptococcus pneumoniae (strain R6)
gi|15902416, gi|... - gi|15902416|ref|NP_357966.1| seryl-tRNA synthetase [Streptococcus pneumoniae R6], gi|15457932|gb|AAK...
445.0 [0..1] [435..22]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDINLFREE KGNNPEIIRE SQRRRFASVE IVDEIIKLDK EWRQRQFEVD SFRKEFNKLN  60
   61 KQVAQLKIKK EDASEIIQQT EKNKQDSTAK EAEVREAYAA LKAKLEQVGN LVHDSVPVDK 120
  121 DEANNLVIKL WGEKRFSTPG LKLKNHVDLV ELLGIADTKR GAEIAGARGF FLKGDGLMLN 180
  181 QALINFGLTF LKKRGFTGLQ PPFFMRKDVM AKCAQLAQFD EELYKVTGEG DDKYLIATAE 240
  241 QPLCAYHIDE WIHPTELPLR YAGYSSCFRK EAGSHGRDTL GIFRVHQFEK IEQFCITGPN 300
  301 ENASWEMLDE MMKNSEDFYQ ALKLPYQIVS IVSGALNDAA AKKYDLEAWF PSSETFRELV 360
  361 SCSNCTDYQA RRLEIRYGQK KSNEQTKQYV HMLNSTLTAT ERTICCILEN YQREDGVDIP 420
  421 EVLQPFMGGE TFLPFKAKPV VADTKGKKSK A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 2dq3A
Description: No description for 2dq3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle