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Protein Overview: gi|149053743, gi...

General Information:
Name(s) found: gi|157820255 [NCBI NR]
gi|149053743 [NCBI NR]
Description(s) found:
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  • gi|157820255|ref|NP_001100505.1| mediator complex subunit 13 [Rattus norvegicus] [NCBI NR]
  • gi|149053743|gb|EDM05560.1| thyroid hormone receptor associated protein 1 (predicted) [Rattus norvegicus] [NCBI NR]
  • mediator complex subunit 13 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • thyroid hormone receptor associated protein 1 (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Protein Med13 OS=Rattus norvegicus GN=Med13 PE=4 SV=2 [20141208_RAT.fasta]
  • Protein Med13 OS=Rattus norvegicus GN=Med13 PE=1 SV=2 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 2040 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    mediator complex [UNKNOWN][IEA]
    Biological Process: steroid hormone receptor signaling pathway [UNKNOWN]
    androgen receptor signaling pathway [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    transcription initiation from RNA polymerase II promoter [UNKNOWN]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: transcription cofactor activity [UNKNOWN]
    transcription coactivator activity [UNKNOWN]
    transcription activator activity [UNKNOWN]
    receptor activity [UNKNOWN]
    RNA polymerase II transcription mediator activity [UNKNOWN][IEA]
    thyroid hormone receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRNFVRIGK WFVKPYEKDE KPINKSEHLS CSFTFFLHGD SNVCTSVEIN QHQPVYLLSE  60
   61 EHVTLAQQSN SPFQVILSPF GLNGTLTGQA FKMSDSATKK LIGEWKQFYP ISCGLKEMSE 120
  121 EKQEDMDWED DSLAAVEVLV AGVRMIYPAC FVLVPQSDIP TPSSVGSSHC SASCLGIHQV 180
  181 PASTRDPAMS SVTLTPPTSP EEVQSVDPQS AQKWVKFSSV SDGFSTDSTS HHGGKIPRKL 240
  241 ANHVVDRVWQ ECNMNRLQNK RKYSATSSGL CEEETADKIG SWDFVEATQR TSCSCLRHKS 300
  301 LKTRNTGQQG QAPSLGQQQQ ILPKHKTNEK QEKSEKPQKR PLTPFHHRVS ISDDIGMDTD 360
  361 SASQRLVISA ADSQVRFTNI RTNDVAKTPQ MHGTELANSP QPPPLSPHPC DVVDEGVTKT 420
  421 PSTPQSQHFY QMPTPDPLVP TKPMEDRIDS LSQSFPPPFQ EAVEPTVYVG TAVSLEEDEA 480
  481 NVAWKYYKVP KKKDVEFLPP QLPNDKFKDD PVGPFGQESV TSVTELMVQC KKPLKVSDEI 540
  541 VQQYQIKNQY LSAIASDTEQ EPKIDPYAFV EGDEEFIFTD KKDRQNSERE AGKKHKVEDG 600
  601 TSAVTVLSHE EDAMSLFSPS KQDAPRPANH ARPPSTSLIY DSDLAVSYTD LDNLFNSDED 660
  661 ELTPGSKKSA SGSDDKASSK ESKTGSLDPL SCISTADLHK MYPTPPSLEQ HIMGFSPMNM 720
  721 NNKEYGSMDP TPGGTVLEGS SSSVGTQFRI EVEEGFCSPK PSEIKDFSYV YKPENCQVLV 780
  781 GCSMFAPLKT LPSHCLPPIK LPEECVYRQS WTVGKLDLLP SGPSMPFIKE GDGSNLDQDY 840
  841 GPAYTPQIHT SFGMPPSSAP PSNGGAGILP SPSTPRFPTP RTPRTPRTPR GAGGPASAQG 900
  901 SVKYENSDLY SPASTPSTCR PLNSVEPATV PSIPEAHSLY VNLILSESVM NLFKDCNFDS 960
  961 CCICVCNMNI KGADVGVYIP DPTQEAQYRC TCGFSAVMNR KFGNNSGLFL EDELDIIGRN1020
 1021 TDCGKEAEKR FEALRASSVE NVNGSLKESE KVPDELILLL QDQCTNLFSP FGAADHDPFP1080
 1081 KAGISSNWVR VEERDCCSDC CLALEHGRQF MDNMSGGKVD EALVRSSCLH PWAKQNDASV1140
 1141 QCSQDILRML LSLQPVLQDA IQKKRTVRPW GVQGPLTWQQ FHKMAGRGSY GTDESPEPLP1200
 1201 IPTFLLGYDY DFLVLSPFAL PYWEKLMLEP YGSQRDIAYV VLCPENEALL NGARSFFRDL1260
 1261 TAIYESCRLG QHRPISRLLT DGIMKVGATA SKKLSEKFVT EWFSQAADGN NEAFSKLKLY1320
 1321 AQVCRYDLGP YLASQPLDSS LLSQPNLVAP PNQSLVTAPQ MTNTGNANAP SATLASAASS1380
 1381 TMTLTPGVAI STSVATANST LTTTSSSSSS SMSSGVSSNK LPSFPPFGSM NTSGTGSMSA1440
 1441 QGSTVQSGQL GGQQSSSLQA AGISGESASL PTQPHPDVSE STMDRDKVGI PTDGDSHAIT1500
 1501 YPPAIVVYII DPFTYENKDE STSSSNVWTL GLLRCFLEML QTLPPHIKST VSVQIVPCQY1560
 1561 LLQPVKHDDR QIYSQHLKSL AFSAFTQCRR PLPTSTNVKT LTGFGPGLAM ETALKSPDRP1620
 1621 ECIRLYTPPF ILAPVKDKQT ELGETFGEAG QKYNVLFVGY CLSHDQRWIL ASCTDLYGEL1680
 1681 LETCIINIDV PNRARRKKGS ARRFGLQKLW EWCLGLVQMS SLPWRVVIGR LGRIGHGELK1740
 1741 DWSCLLSRRN LQSLSKRLKD MCRMCGISAA DSPSILSACL VAMEPQGSFV IMPDSVSTGS1800
 1801 VFGRSTTLNM QTPQLNTPQD TSCTHILVFP TSASVQVASA TYTTENLDLA FNPNNDGADG1860
 1861 MGIFDLLDTG DDLDPDIINI LPASPTTSPV HSPGSHYPHG GDAGKGQGTD RLLSTESHDE1920
 1921 VTNILQQPLA LGYFVSTAKA GPLPDWFWSA CPQAQYQCPL FLKASLHLHV PSVQSDELLH1980
 1981 SKHSHPLDSN QTSDVLRFVL EQYNALSWLT CDPAIQDRRS CLPIHFVVLN QLYNFIMNML2040
 2041

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle