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Protein Overview: gi|149046866

General Information:
Name(s) found: gi|149046866 [NCBI NR]
Description(s) found:
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  • gi|149046866|gb|EDL99640.1| rCG64566 [Rattus norvegicus] [NCBI NR]
  • rCG64566 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: Fraser syndrome 1 homolog (human) isoform 1 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 3956 amino acids

    Gene Ontology:
    Cellular Component: basement membrane [UNKNOWN]
    integral to membrane [IEA]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    morphogenesis of an epithelium [UNKNOWN]
    cell communication [IEA]
    protein transport [UNKNOWN]
    skin development [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVFKAWLGV ALALAEFAVL PHCEGACLYR GSLLADATIW KPDSCQNCRC HGDIVICKPV  60
   61 VCKNPRCAFE KGEVLWIAPN QCCPQCAPRT PGSCHHEGKI REHGTEWASG PCTLCSCTYG 120
  121 EVRCSHQQCT PLSCGPQELE FLAEGHCCPI CVGTGKPCSD DGHVFQDGED WPLSHCAKCV 180
  181 CRNGLTQCFT AQCQPLFCNQ DEIVVRVPGK CCSQCSSRSC STAGQVYEHG EQWKEDACTL 240
  241 CMCDQGQVRC HKQACPPLRC AKGQSKARHH GQCCEECVSP VRSCSSGGVL RYQDEMWKGS 300
  301 ACEFCVCDQG QVTCQTGECA KVACAPGEEL VHLEGKCCPE CISRNDYCVY EEKAEIMSSN 360
  361 SSEIKHVPEG KKWEEGPCKL CECREAQVTC YEPSCPPCPV ATLAMAVKGQ CCPDCTPVHC 420
  421 HPDCLTCSHS PEHCDLCQDP TKLLQNGRCV PSCGLGFYQA GSLCLACQPQ CSTCTSSLEC 480
  481 SSCLPPLLMQ QGQCVSTCGD GFYQDHHSCA VCHESCAGCW GPTEKHCVAC RDPLLVLRDG 540
  541 SCENTCGNGF YNRQGTCVAC DQSCKSCGPS SPRCLTCAEK TVLYDGTCIS ECPRGYYADA 600
  601 TGRCKVCHVS CASCSGPAAA HCTACVHPQV LRQGHCLPSC GGGFYPDHGI CGACHGSCHT 660
  661 CVGPEPTHCT QCKKPEAGLQ VEQHSGENVP YGKCVSQCGA HFYLESTGLC EACHPSCLLC 720
  721 EGKSPRNCTG CGPAHVLLAG RCLSQCPETH FNQEGTCTEC HPSCRQCHGP LESDCVSCHP 780
  781 HLTLSSGRCK ASCKDEQFLN LVGYCADCHP LCQHCVANLQ DTGSVCLKCQ HARHLLLGDH 840
  841 CVPDCPPGHY KERGTCKRCH PSCRSCQNGG PFSCSSCNTG LVLTHIGACS STCFPGHYLD 900
  901 DNQACQPCNR HCRSCDSQGS CTSCRDPSKV LLFGECQYES CAPQYYLDIS TKTCKECDWS 960
  961 CNACTGPLRT DCLQCMDGYV LQDGVCVEQC SPQHYRDSGS CKRCDSHCLQ CQGPHECTRC1020
 1021 EGPFLLFRAQ CVQECAKGYF ADHAEHKCTA CPQGCLQCSH KDRCHLCDHG FFLKSGFCMP1080
 1081 TCVPGFSGHS SNETCTDKVY TPSLHVNGSL TLGIGSMKPL DFSLLNIQHQ DGRVEDLLFH1140
 1141 IVSTPTNGQL LLSRNGKEVQ LEKAGHFSWK DVNGKKVRFV HSKEKLRKGY FSLKISDQQF1200
 1201 FFEPQLINIQ AFSTQAPYVL RNEVLHISKG ERAAITTQLL DIRDDDNPQD VVLNVLDPPR1260
 1261 HGQLLRTPPA PAASVYQFHV DELSRGLLLY AHDGSDSTSD IIVFQANDGH SFQNILFREV1320
 1321 VLLMNLPADS PAGPAEEGHH LPDGRMTTPV STFSQQDIDD GIVWYRHSGA TAQSDSFHFQ1380
 1381 VSTATNAQEH PQSHMFNIAI LPQALEAPKL SLGTSLHMTA REDGLSVIHP QSLSFGKAES1440
 1441 PSGKIIYNIT VPLHPNQGVI EHRGRPNSPI RYFTQEEINQ GQIMYRPPAA PPHLQEFMAF1500
 1501 SFAGLPESVR FYFTVSDGQH TSPEMALTIH LLHSDRQPPA FQIKAPLLEV SPGGRTPLGL1560
 1561 QLVVRDAEVV PEELFFQLQK PPQHGMLMKY TAKSSVTMSA GDTFTYDEVE RNVLQYVHDG1620
 1621 SPAWEDNMEI SVTDGLTVTT SEVKVEVSPS ENREPRLAPG SSLSMTVASQ HTAIITRSHL1680
 1681 AYVDDSSPDS EIWIQLSSLP LYGVLLKTSG PDMEELSGDS NFTMEDINSK NIRYSAVFET1740
 1741 EGQSVTDGFH FSVSDMDNNR VDNQVFTITV TPAENPPHII AFADLITVDE GGRAPLSLHH1800
 1801 FFATEDQDNL QGDAVIKLSA LPKYGCIENT GTGDRFGPGA NSELEASFPI QDVLENYIYY1860
 1861 FQSVHESIEP THDVFSFYVS DGSGRSEIHS INITIERKND EPPRMTLRPL GVRLSSGVAI1920
 1921 SNSSLSLQDL DTPNNELIFV LMKKPDHGYL LLRPTASDPL ENGTVLDQGS SFTYQDILAG1980
 1981 LVGYLPGDIY MAVDEFRFSL TDGLHVDTGR MEIYIELPTS NIPHLAINRG LQLSAGSVAR2040
 2041 ITEQHLRATD TDSEAGQLVY IVKEDPGAGH LQMTKADKLE QISVRGPIRS FTQADVSQGQ2100
 2101 IEYSHGPGEA GGSFAFKFDV VNGEGNKLAD QSFSINVLED KSPPVIITNK GLVLDENSVE2160
 2161 KITTAQLLAT DQDSKPTELI YRITSQPQLG HLEHVASPGI QISSFTQADL TSRNVQYVHS2220
 2221 SGTGKLSDAF SFVLSDGLHE VTQTFSITIH PVDDSLPLVQ NRGMRVQEGV RKTITEFELK2280
 2281 AVDVDTEAES ITFTIVQPPR HGTIERTARG QRYQLTSSFT MEDIYQNRVS YSHDGSNSLK2340
 2341 DRFTFTVSDG TNPFFIIEEG GEEIMTAAPQ QFLVDILPVD DGTPRIVTNL GLQWLEYMDG2400
 2401 KATNLITKKE LLTVDPDTED SQLTYEVTTG PMHGYVENKL QPGRVAATFT QEHVNLGLIR2460
 2461 YVLYEEKIQK MMDSFQFLVK DSKPNVVSDN IFYIHWSLIS FKYTSYNVSE KAGSVSVMVQ2520
 2521 RTGNLNQYAI VLCRTEQGTA SSSSRVSSHP GQQDYVEYAG QVQFDEREDT KSCTIVINDD2580
 2581 DVFENIESFT VELSMPAYAL LGEFTQAKVI INDTEDEPTL EFDKKTYRVN ESAGFLFAPI2640
 2641 KRQGDPSSAV SAICYTVPKS AMGSSLYALE SGSDFKSRGR SVESRVLLGP GVTTSTCDVM2700
 2701 VIDDSEYEEE EEFEIALADA SNNARIGRLA VAKVLISGPN DASTVSLGNT AFTISEDAGT2760
 2761 VKVPVIRHGT DLSTFTSVWC ATRPSDPASA TPGVDYVPSS RKVEFGPGVT EQYCTLTILD2820
 2821 DTQYPVIEGL ETFVVFLSSA QGAELTKPSQ AVIAINDTFQ DVPSMQFSKD LLLVKEKEGV2880
 2881 LHIPIIRSGD LSYESSVRCY TQSHSAQVME DFEERRNADS SRITFLKGEK AKNCTVYIHD2940
 2941 DSMFEPEEQF RVYLGHPLGN HWSGARIGKN SMATVTISND EDAPTIEFEE AAHQVREPAG3000
 3001 PDATAVLSVK VIRRGDQNRT SKIRCSTRDG SAQSGVDYYP KSRVLKFSPG VDHIFFKVEI3060
 3061 LSNEDREWHE SFSLVLGPDD PVEAVLGDVT TATVTILDQE AAGSLILPAP PIVVTLADYD3120
 3121 HVEELSKEGV KKAPSPGYPL VCVTPCDPHY PRYAVMKERC SEAGINQTSV QFSWEVAAPT3180
 3181 DGNGARSPFE TITDSTPFTS VNHKVLDSIY FSRRFHVRCV AKAVDKVGHV GTPLRSNVVT3240
 3241 IGTDSAICHT PVVAGTARGF QAQSFIATLK YLDVKHKEHP NRIHISVQIP HQDGMLPLIS3300
 3301 TMPLHNLHFL LSESIYRQQH VCSNLVTARD LRGLSEAGFL DDAGLHSTAL GPGYDRPFQF3360
 3361 DPSVREPKTI QLYRHLNLKS CVWTFDAYYD MTELIDVCGG SVTADFQVRD SAQSFLTVHV3420
 3421 PLYVSYIYVT APRGWASLEH HTEMEFSFFY DTVLWRTGIQ TDSVLSARLQ ILRIYIREDG3480
 3481 RLVIEFKTHA KFRGQFVIEH HTLPDVKSFI LTPDHLGGIQ FDLQLLWSAQ TFDSPHQLWR3540
 3541 ATSSYNRKDY SGEYTIYLIP CTVQPTQPWV DPGEKSLACT AHAPERFLIP IAFQQTNRPV3600
 3601 PVVYSLNTEF QLCNNEKVFL MDPNTSDMSL AEMDYKGAFS KGQILYGRVL WNPEQNLHSA3660
 3661 YKLQLEKVYL CTGKDGYVPF FDPTGTIYNE GPQYGCIQPN KHLKHRFLLL DRSQPEVTDK3720
 3721 YFHDVPFEAH FASELPDFQV VSSMPGVDGF TLKVDALYKV EAGHQWYLQV IYIISPDSIS3780
 3781 RPRVQRSLTA SLRRHQRDLV DPSGWLSLDD SLIYDNEGDQ VKNGTNMKSL NLELQEPVIA3840
 3841 ASLSQSGASI GSALAALMLL LLLFLVACFI TRKCQKQKKK QPPEDTLEEY PLNTKVDVAK3900
 3901 KNTDKGEKNA NRQYCTVRNV NILSDSEGYY TFKGAKVKKL NLEVRVHNNL QDGTEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle