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Protein Overview: CE40946

General Information:
Name(s) found: CE40946 [WormBase]
Description(s) found:
Found 9 descriptions.
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  • WBGene00009131 status:Confirmed UniProt:A5JYS8 protein_id:CAN86601.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEALink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]
    tRNA methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEETIEKFE DNVEHQNQDQ LPEGMSKKQL RRQKYKVKWE EKKLVKRAAE RIRKKEKRAA  60
   61 LKESGDLSKL RKRKDFRTMA QSNSKQRIAL DMSFDDLMIE KDQKRTVQQI GWCYTANRHS 120
  121 PDPFQFHVVG FDGPSRKIYD GNEHNLNQDI HLHQEKLENL FKPEEIVYLT SESENVLSDL 180
  181 DDTKVYVIGG IVDHNSQKGL CYRIAQEKGF GHAKLPLDEH LLMKSRRVLT INQVYEILVH 240
  241 YSVHKNWKDA LLSIIPERKN AQLKEEVVEE KPESLEEIGK LDTESTDTAT GSPKIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] MSA 3.084997 View MSA. No confident structure predictions are available.
    2 View Details [79..296] Pfam 76.113509 No description for PF01746.12 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle