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Protein Overview: PAND_ECOLI, PAND...

General Information:
Name(s) found: PAND_ECOLX [Swiss-Prot]
PAND_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||C64736 aspartate 1-decarboxylase (EC 4.1.1.11) [validated] - Escherichia coli (strain K-12) [NCBI NR]
  • gi|67470411|sp|P0A790.1|PAND_ECOLI RecName: Full=Aspartate 1-decarboxylase; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Pr [NCBI NR]
  • gi|304930|gb|AAA24274.1| aspartate-1-decarboxylase [NCBI NR]
  • pir||G85496 aspartate 1-decarboxylase [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||G90645 aspartate 1-decarboxylase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209746152|gb|ACI71383.1| aspartate 1-decarboxylase [Escherichia coli] [NCBI NR]
  • gi|209746150|gb|ACI71382.1| aspartate 1-decarboxylase [Escherichia coli] [NCBI NR]
  • gi|209746148|gb|ACI71381.1| aspartate 1-decarboxylase [Escherichia coli] [NCBI NR]
  • gi|209746146|gb|ACI71380.1| aspartate 1-decarboxylase [Escherichia coli] [NCBI NR]
  • gi|209746144|gb|ACI71379.1| aspartate 1-decarboxylase [Escherichia coli] [NCBI NR]
  • gi|187470909|sp|P0C7I4.1|PAND_ECOLX RecName: Full=Aspartate 1-decarboxylase; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: P [NCBI NR]
  • Aspartate 1-decarboxylase OS=Escherichia coli GN=panD PE=1 SV=1 [Swiss-Prot]
  • Aspartate 1-decarboxylase precursor (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain] - Escherichia coli [Swiss-Prot]
  • aspartate 1-decarboxylase [Escherichia coli K12]gi|15829389|ref|NP_308162.1| aspartate 1-decarboxylase [Escherichia coli O157:H7]gi|30061696|ref|NP_835867.1| aspartate 1-decarboxylase [Shigella flexneri 2a str. 2457T]gi|26246071|ref|NP_752110.1| Aspart [nrdb_11152004_Chlamydomonas]
  • Aspartate 1-decarboxylase precursor (Aspartate alpha-decarboxylase) [Contains: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Aspartate 1-decarboxylase OS=Escherichia coli (strain K12) GN=panD PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTMLQGKL HRVKVTHADL HYEGSCAIDQ DFLDAAGILE NEAIDIWNVT NGKRFSTYAI  60
   61 AAERGSRIIS VNGAAAHCAS VGDIVIIASF VTMPDEEART WRPNVAYFEG DNEMKRTAKA 120
  121 IPVQVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 56.221849 Native precursor of pyruvoyl dependent Aspartate decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartate 1-decarboxylase activity
    		•  5.28630608185839 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.90738294399091 bayes_pls_golite062009
  • catalytic activity
    		•  1.55034677075026 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.31402947495071 bayes_pls_golite062009
  • lyase activity
    		•  0.300409233756216 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle