YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: OMPN_ECOLI

General Information:
Name(s) found: OMPN_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Outer membrane protein N precursor (Porin ompN) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSKVLALLI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNSAK DGDQSYARLG  60
   61 FKGETQINDQ LTGYGQWEYN IQANNTESSK NQSWTRLAFA GLKFADYGSF DYGRNYGVMY 120
  121 DIEGWTDMLP EFGGDSYTNA DNFMTGRANG VATYRNTDFF GLVNGLNFAV QYQGNNEGAS 180
  181 NGQEGTNNGR DVRHENGDGW GLSTTYDLGM GFSAGAAYTS SDRTNDQVNH TAAGGDKADA 240
  241 WTAGLKYDAN NIYLATMYSE TRNMTPFGDS DYAVANKTQN FEVTAQYQFD FGLRPAVSFL 300
  301 MSKGRDLHAA GGADNPAGVD DKDLVKYADI GATYYFNKNM STYVDYKINL LDEDDSFYAA 360
  361 NGISTDDIVA LGLVYQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 53.0 Porin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  1.53359142384353 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.109053674865783 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle