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Protein Overview: nxf2-PB, nxf2-PA

General Information:
Name(s) found: nxf2-PB / FBpp0088484 [FlyBase]
nxf2-PA / FBpp0088483 [FlyBase]
Description(s) found:
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  • gi|45551570|ref|NP_730179.2| nuclear RNA export factor 2, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|45549207|ref|NP_524111.3| nuclear RNA export factor 2, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|45445859|gb|AAF49447.3| nuclear RNA export factor 2, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|45445858|gb|AAF49448.3| nuclear RNA export factor 2, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|20978541|sp|Q9VV73.1|NXF2_DROME RecName: Full=Nuclear RNA export factor 2 [NCBI NR]
  • gi|18447654|gb|AAL68387.1| SD08161p [Drosophila melanogaster] [NCBI NR]
  • gi|14456090|emb|CAC41644.1| nuclear RNA export factor 2 (NXF2) [Drosophila melanogaster] [NCBI NR]
  • Nuclear RNA export factor 2 OS=Drosophila melanogaster GN=nxf2 PE=2 SV=1 [Swiss-Prot]
  • The gene nuclear RNA export factor 2 is referred to in FlyBase by the symbol Dmel\nxf2 (CG4118, FBgn0036640). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:16569959..16573387. It has the cytological map location 73A9. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mRNA export from nucleus. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • (Q9VV73) Nuclear RNA export factor 2 [DrosMelano7227.FASTAC.txt]
  • (AAF49447) CG4118-PA [DrosMelano7227.FASTAC.txt]
  • (AE003527) CG4118 gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta]
  • (AE003527) CG4118 gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4118-PB, isoform B [Drosophila melanogaster]gi|45445858|gb|AAF49448.3| CG4118-PA, isoform A [Drosophila melanogaster]gi|18447654|gb|AAL68387.1| SD08161p [Drosophila melanogaster]gi|14456090|emb|CAC41644.1| nuclear RNA export factor 2 (NXF2) [Drosophi [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448 [fly-100309-contam.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447 [fly-100309-contam.fasta]
  • Nuclear RNA export factor 2 [nr-271106-contam.fasta]
  • SD08161p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4118-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • nuclear RNA export factor 2 CG4118-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • nuclear RNA export factor 2 CG4118-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • nuclear RNA export factor 2 (NXF2) [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4118-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448,FlyMine:FBpp0088483,modMine:FBpp0088483; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(16570107..16570412,16570483..16571613,16571676..16571777,16571837..16571983,16572046..16572183,16572236..16572691,16572752..16572997); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448,FlyMine:FBpp0088483,modMine:FBpp0088483; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448,FlyMine:FBpp0088483,modMine:FBpp0088483; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0088483 type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448,FlyMine:FBpp0088483,modMine:FBpp0088483; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0088484 type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088483; name=nxf2-PA; parent=FBgn0036640,FBtr0089478; dbxref=GB_protein:AAF49448.2,FlyBase:FBpp0088483,FlyBase_Annotation_IDs:CG4118-PA,GB_protein:AAF49448.3,REFSEQ:NP_524111,GB_protein:AAF49448,UniProt/Swiss-Prot:Q9VV73,FlyMine:FBpp0088483,modMine:FBpp0088483; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(16579652..16579897,16579136..16579591,16578946..16579083,16578737..16578883,16578576..16578677,16577383..16578513,16577007..16577312)); ID=FBpp0088484; name=nxf2-PB; parent=FBgn0036640,FBtr0089479; dbxref=GB_protein:AAF49447.2,FlyBase:FBpp0088484,FlyBase_Annotation_IDs:CG4118-PB,GB_protein:AAF49447.3,REFSEQ:NP_730179,GB_protein:AAF49447,UniProt/Swiss-Prot:Q9VV73; MD5=63cdde22c8fb86ec5a27aec95b953444; length=841; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 841 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    nucleoplasm [IDA][NAS]
    Biological Process: mRNA export from nucleus [ISS][NAS]
    mRNA transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNQMRVLDF GDGSVPIQLD YPDSKIFSKC SSYGDRVPGT HWNEITVHHK GRLEYSPNPE  60
   61 QIILDALYQA IDGADFFPVF YQRGKNMDTM LVRNCKAAID KLFKQRLSIN LKGGASIPIS 120
  121 IQLGVAQYQR HQITPTFHIA RVVTRLMKQL IQRDGVDGLL NLDNFGSHPE FKNLVVSLGN 180
  181 PSILMNVCQV IHNDDNERFR LNGFILSNNR IRDIRPLTLL ANVDYALLDL RGNKIKSAER 240
  241 LCRALEQFRA RELLLENNPI VKISNFPANI KSLESNFELV DGKPFNMLHK IFSPLDVEID 300
  301 LEVDGARIDT NNMWKLPEFE NSQHWHAFMI PDPSHEFNQE VFFDFFFIRL DPTLSNFYPC 360
  361 YYKYINTEHV FLVRNCFDQI AHLVNNCNLE MTIPTGDRIF RYYLRMNVST VKQHHVDPEE 420
  421 CIQKAVSQCY VAQNRMLNLE RFHSRECLKD VMVSLSSPKI LTYVLSVASR KFMTTCSEIR 480
  481 LCHNKVLVLD GAHVLGMMGC LRAVDLSHNW VQDLSSIHSL GNLPLKSLVL HGNKLCRNYR 540
  541 LPSEYVRAVK EVFPQLTTLD GVDLQTNPGQ SLQKNFLCDT GAYELVGAFL ENYLREFEND 600
  601 EFRHNLYKYY SENSIFTLTC NYNVVQNHQT PKILQRLSKY NRHARNLRNK DYSKASDGVF 660
  661 FGCTYIVEIL LQLPRVTHDF HSLQTDVMHY NGKGAVIYVA GLLRDEPPST RNGHGSKTDI 720
  721 GGVLLGFSRQ FVVTFDEANL GLGKRARRLK IANERLHITN PSKTAIRNAF SVNFPDPSER 780
  781 QAEEDSLDVK DHKLLLFQEV TGLISTWVTS IVEEADWDFE RALKLFIQKN ADHEIPDLAF 840
  841 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle