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Protein Overview: NUDH_PASMU, RPPH...

General Information:
Name(s) found: RPPH_PASMU [Swiss-Prot]
NUDH_PASMU [Swiss-Prot]
Description(s) found:
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  • gi|38230510|gb|AAR14276.1| PnhA [Pasteurella multocida] [NCBI NR]
  • gi|13431741|sp|P57809.1|RPPH_PASMU RecName: Full=RNA pyrophosphohydrolase; AltName: Full=(Di)nucleoside polyphosphate hydrolase [NCBI NR]
  • RNA pyrophosphohydrolase OS=Pasteurella multocida GN=rppH PE=3 SV=1 [Swiss-Prot]
  • Probable - Pasteurella multocida [Swiss-Prot]
  • PnhA [Pasteurella multocida]gi|15601947|ref|NP_245019.1| hypothetical protein PM0082 [Pasteurella multocida subsp. multocida str. Pm70]gi|12720291|gb|AAK02166.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]gi|13431741|sp|P57809|NUDH_PASMU [nrdb_11152004_Chlamydomonas]
  • Probable (di)nucleoside polyphosphate hydrolase [nr-271106-contam.fasta]
  • PnhA [Pasteurella multocida] [nr-271106-contam.fasta]
  • RNA pyrophosphohydrolase OS=Pasteurella multocida (strain Pm70) GN=rppH PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Pasteurella multocida
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDFDGYRPN VGIVICNSKG QVLWAKRYGQ NSWQFPQGGI NDNESAEQAM YRELFEEVGL  60
   61 SPKDVKILYI SKHWLRYKLP KRLLRYDSKP VCIGQKQRWF LLQLVSDEKN INMQSSKSPE 120
  121 FDGWRWVSFW YPVRQVVSFK KEVYRKAMKE FASVLFDGAK ENLLSSKSNE SDLKTHHTTK 180
  181 KSTFLTKHSK KHFHKSRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 26.0 Diadenosine tetraphosphate hydrolase (Ap4A hydrolase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.86826130963189 bayes_pls_golite062009
  • catalytic activity
    		•  1.86119802438676 bayes_pls_golite062009
  • RNA pyrophosphohydrolase activity
    		•  0.681788425915311 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.544115189438 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.54377405132398 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.468153646537656 bayes_pls_golite062009
  • binding
    		•  0.0581982566440131 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle