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Protein Overview: NAGD_ECOLI

General Information:
Name(s) found: NAGD_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|88192540|pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain [NCBI NR]
  • gi|84028403|sp|P0AF24.1|NAGD_ECOLI RecName: Full=Protein nagD [NCBI NR]
  • pir||B64802 nagD protein - Escherichia coli (strain K-12) [NCBI NR]
  • gi|42081|emb|CAA32355.1| unnamed protein product [Escherichia coli] [NCBI NR]
  • pir||A85567 N-acetylglucosamine metabolism [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||A90717 N-acetylglucosamine metabolism [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209776836|gb|ACI86730.1| N-acetylglucosamine metabolism [Escherichia coli] [NCBI NR]
  • gi|209776834|gb|ACI86729.1| N-acetylglucosamine metabolism [Escherichia coli] [NCBI NR]
  • gi|209776832|gb|ACI86728.1| N-acetylglucosamine metabolism [Escherichia coli] [NCBI NR]
  • gi|209776830|gb|ACI86727.1| N-acetylglucosamine metabolism [Escherichia coli] [NCBI NR]
  • gi|209776828|gb|ACI86726.1| N-acetylglucosamine metabolism [Escherichia coli] [NCBI NR]
  • Protein nagD - Escherichia coli [Swiss-Prot]
  • N-acetylglucosamine metabolism; putative phosphatase in N-acetylglucosamine metabolism [Escherichia coli K12]gi|15829959|ref|NP_308732.1| N-acetylglucosamine metabolism [Escherichia coli O157:H7]gi|15800377|ref|NP_286389.1| N-acetylglucosamine metabolis [nrdb_11152004_Chlamydomonas]
  • Protein nagD [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • unnamed protein product [Escherichia coli] [nr-271106-contam.fasta]
  • Chain A, Nagd From E.Coli K-12 Strain [nr-271106-contam.fasta]
  • Protein nagD OS=Escherichia coli (strain K12) GN=nagD PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Ribonucleotide monophosphatase NagD OS=Escherichia coli (strain K12) GN=nagD PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG  60
   61 VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR 120
  121 SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW 180
  181 IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI 240
  241 YPSVAEIDVI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. NAGD_ECOLI gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 44.39794 NagD from E.coli K-12 strain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • hydrolase activity
    		•  1.08172369228125 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle