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View Structure Prediction Details

Protein: NAGD_ECOLI
Organism: Escherichia coli
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAGD_ECOLI.

Description E-value Query
Range
Subject
Range
gi|51974042, gi|... - gi|52140573|ref|YP_086257.1| 4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase) [Bac...
191.0 [0..2] [249..1]
gi|217962424, gi... - gi|217962424|ref|YP_002340996.1| phosphatase,haloacid dehalogenase family [Bacillus cereus AH187], g...
gi|218906151, gi... - gi|218906151|ref|YP_002453985.1| phosphatase,haloacid dehalogenase family [Bacillus cereus AH820], g...
gi|196040536, gi... - gi|196040536|ref|ZP_03107836.1| phosphatase,haloacid dehalogenase family [Bacillus cereus NVH0597-99...
gi|206970312, gi... - gi|206970312|ref|ZP_03231265.1| phosphatase,haloacid dehalogenase family [Bacillus cereus AH1134], g...
gi|228829663, gi... - gi|228929983|ref|ZP_04092994.1| hypothetical protein bthur0010_46650 [Bacillus thuringiensis serovar...
gi|228835822, gi... - gi|228923693|ref|ZP_04086971.1| hypothetical protein bthur0011_46680 [Bacillus thuringiensis serovar...
gi|228842065, gi... - gi|228917585|ref|ZP_04081129.1| hypothetical protein bthur0012_47910 [Bacillus thuringiensis serovar...
gi|228856151, gi... - gi|228903466|ref|ZP_04067591.1| hypothetical protein bthur0014_46270 [Bacillus thuringiensis IBL 422...
gi|228710427, gi... - gi|229072451|ref|ZP_04205653.1| hypothetical protein bcere0025_46120 [Bacillus cereus F65185], gi|22...
gi|229049653, gi... - gi|229049653|ref|ZP_04194210.1| hypothetical protein bcere0027_46110 [Bacillus cereus AH676], gi|228...
gi|221242468, gi... - gi|222098409|ref|YP_002532467.1| 4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase) ...
gi|228771498, gi... - gi|228988201|ref|ZP_04148298.1| hypothetical protein bthur0001_48590 [Bacillus thuringiensis serovar...
gi|228823372, gi... - gi|228936256|ref|ZP_04099055.1| hypothetical protein bthur0009_46940 [Bacillus thuringiensis serovar...
gi|229141677, gi... - gi|229141677|ref|ZP_04270207.1| hypothetical protein bcere0013_47670 [Bacillus cereus BDRD-ST26], gi...
gi|229130219, gi... - gi|229130219|ref|ZP_04259178.1| hypothetical protein bcere0015_46550 [Bacillus cereus BDRD-Cer4], gi...
gi|228658835, gi... - gi|229124495|ref|ZP_04253680.1| hypothetical protein bcere0016_47790 [Bacillus cereus 95/8201], gi|2...
gi|229112405, gi... - gi|229112405|ref|ZP_04241943.1| hypothetical protein bcere0018_46450 [Bacillus cereus Rock1-15], gi|...
gi|228602153, gi... - gi|229181260|ref|ZP_04308590.1| hypothetical protein bcere0005_46020 [Bacillus cereus 172560W], gi|2...
gi|229158555, gi... - gi|229158555|ref|ZP_04286614.1| hypothetical protein bcere0010_47280 [Bacillus cereus ATCC 4342], gi...
gi|228630251, gi... - gi|229153152|ref|ZP_04281331.1| hypothetical protein bcere0011_46820 [Bacillus cereus m1550], gi|228...
gi|229147508, gi... - gi|229147508|ref|ZP_04275855.1| hypothetical protein bcere0012_46370 [Bacillus cereus BDRD-ST24], gi...
gi|229199107, gi... - gi|229199107|ref|ZP_04325790.1| hypothetical protein bcere0001_46200 [Bacillus cereus m1293], gi|228...
gi|228590218, gi... - gi|229193241|ref|ZP_04320192.1| hypothetical protein bcere0002_48880 [Bacillus cereus ATCC 10876], g...
gi|49480351, gi|... - gi|49480351|ref|YP_038978.1| 4-nitrophenylphosphatase (p-nitrophenylphosphate phosphohydrolase) [Bac...
gi|42784142, gi|... - gi|42784142|ref|NP_981389.1| phosphatase [Bacillus cereus ATCC 10987], gi|42740073|gb|AAS43997.1| ph...
gi|30022999, gi|... - gi|30022999|ref|NP_834630.1| 4-nitrophenylphosphatase [Bacillus cereus ATCC 14579], gi|29898559|gb|A...
190.0 [0..2] [249..1]
gi|47566995, gi|... - gi|47566995|ref|ZP_00237712.1| HAD-superfamily subfamily IIA hydrolase, TIGR01457 [Bacillus cereus G...
190.0 [0..2] [249..1]
gi|254753099 - gi|254753099|ref|ZP_05205135.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|254740639 - gi|254740639|ref|ZP_05198330.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|254735372 - gi|254735372|ref|ZP_05193080.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|254725303 - gi|254725303|ref|ZP_05187086.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|254761441 - gi|254761441|ref|ZP_05213462.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|190561658, gi... - gi|190567154|ref|ZP_03020069.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis Tsianko...
gi|170706929, gi... - gi|170706929|ref|ZP_02897386.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|172082263, gi... - gi|177652257|ref|ZP_02934760.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|167511981, gi... - gi|167639900|ref|ZP_02398168.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|170685633, gi... - gi|170685633|ref|ZP_02876856.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|165870829, gi... - gi|165870829|ref|ZP_02215481.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|49187817, gi|... - gi|49187817|ref|YP_031070.1| phosphatase [Bacillus anthracis str. Sterne], gi|49181744|gb|AAT57120.1...
gi|167529604, gi... - gi|167634854|ref|ZP_02393172.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A0...
gi|47505647, gi|... - gi|47530499|ref|YP_021848.1| phosphatase [Bacillus anthracis str. 'Ames Ancestor'], gi|47505647|gb|A...
gi|30264998, gi|... - gi|30264998|ref|NP_847375.1| phosphatase [Bacillus anthracis str. Ames], gi|30259675|gb|AAP28861.1| ...
gi|254687291 - gi|254687291|ref|ZP_05151148.1| phosphatase,haloacid dehalogenase family protein [Bacillus anthracis...
gi|229265250, gi... - gi|229600842|ref|YP_002869201.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. A...
gi|227817729, gi... - gi|227817729|ref|YP_002817738.1| phosphatase,haloacid dehalogenase family [Bacillus anthracis str. C...
188.0 [0..2] [249..1]
gi|52081724, gi|... - gi|52787110|ref|YP_092939.1| YutF [Bacillus licheniformis ATCC 14580], gi|52349612|gb|AAU42246.1| Yu...
186.0 [0..1] [249..1]
gi|163864871, gi... - gi|89206066|ref|ZP_01184629.1| HAD-superfamily subfamily IIA hydrolase, hypothetical 1:HAD-superfami...
186.0 [0..2] [249..1]
gi|89151819, gi|... - gi|89200207|ref|ZP_01178962.1| HAD-superfamily subfamily IIA hydrolase, hypothetical 1:HAD-superfami...
186.0 [0..2] [249..1]
gi|77979054 - gi|77979054|ref|ZP_00834476.1| COG0647: Predicted sugar phosphatases of the HAD superfamily [Yersini...
184.0 [0..1] [247..1]
gi|25303453, gi|... - pir||AG1744 conserved hypothetical protein and to B. subtilis YutF protein homolog lin2500 [imported...
gi|16801562 - gi|16801562|ref|NP_471830.1| hypothetical protein lin2500 [Listeria innocua Clip11262]
182.0 [0..1] [247..1]
gi|238718423, gi... - gi|77961553|ref|ZP_00825388.1| COG0647: Predicted sugar phosphatases of the HAD superfamily [Yersini...
181.0 [0..1] [247..1]

Back

Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG  60
   61 VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR 120
  121 SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW 180
  181 IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI 240
  241 YPSVAEIDVI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 2c4nA
Description: NagD from E.coli K-12 strain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.55296860681783 bayes_pls_golite062009
hydrolase activity 1.08172369228125 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle