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Protein Overview: KDSD_ECOLI

General Information:
Name(s) found: KDSD_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|7429324|pir||G65110 hypothetical 35.2 kD protein in murZ-rpoN intergenic region - Escherichia coli (strain K-12) [NCBI NR]
  • gi|606135|gb|AAA57998.1| ORF_o328 [Escherichia coli] [NCBI NR]
  • gi|209758074|gb|ACI77349.1| putative isomerase [Escherichia coli] [NCBI NR]
  • gi|209758068|gb|ACI77346.1| putative isomerase [Escherichia coli] [NCBI NR]
  • gi|1176842|sp|P45395.1|KDSD_ECOLI RecName: Full=Arabinose 5-phosphate isomerase [NCBI NR]
  • Arabinose 5-phosphate isomerase (EC 5.3.1.13) - Escherichia coli [Swiss-Prot]
  • putative isomerase; putative phospho-sugar-binding protein/isomerase [Escherichia coli K12]gi|1789588|gb|AAC76229.1| putative isomerase; putative phospho-sugar-binding protein/isomerase [Escherichia coli K12]gi|606135|gb|AAA57998.1| ORF_o328 [Escherichi [nrdb_11152004_Chlamydomonas]
  • Arabinose 5-phosphate isomerase [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Arabinose 5-phosphate isomerase OS=Escherichia coli (strain K12) GN=kdsD PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli (strain K12) GN=kdsD PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHVELQPGF DFQQAGKEVL AIERECLAEL DQYINQNFTL ACEKMFWCKG KVVVMGMGKS  60
   61 GHIGRKMAAT FASTGTPSFF VHPGEAAHGD LGMVTPQDVV IAISNSGESS EITALIPVLK 120
  121 RLHVPLICIT GRPESSMARA ADVHLCVKVA KEACPLGLAP TSSTTATLVM GDALAVALLK 180
  181 ARGFTAEDFA LSHPGGALGR KLLLRVNDIM HTGDEIPHVK KTASLRDALL EVTRKNLGMT 240
  241 VICDDNMMIE GIFTDGDLRR VFDMGVDVRQ LSIADVMTPG GIRVRPGILA VEALNLMQSR 300
  301 HITSVMVADG DHLLGVLHMH DLLRAGVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] PSI-BLAST 39.39794 ISOMERASE DOMAIN OF GLUCOSAMINE 6-PHOSPHATE SYNTHASE COMPLEXED WITH GLUCOSAMINE 6-PHOSPHATE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • D-sedoheptulose 7-phosphate isomerase activity
    		•  2.51573700304958 bayes_pls_golite062009
  • catalytic activity
    		•  1.5278037255884 bayes_pls_golite062009
  • glucose-6-phosphate isomerase activity
    		•  1.27102475335512 bayes_pls_golite062009
  • glutamine-fructose-6-phosphate transaminase (isomerizing) activity
    		•  1.11549102314657 bayes_pls_golite062009
  • isomerase activity
    		•  0.875614547872629 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.718035369881213 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.543772038478781 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle