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Protein Overview: KDSA_PHOLL

General Information:
Name(s) found: KDSA_PHOLL [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 2-dehydro-3-deoxyphosphooctonate aldolase OS=Photorhabdus luminescens subsp. laumondii GN=kdsA PE=3 SV=1 [Swiss-Prot]
    • Organism: Photorhabdus luminescens subsp. laumondii
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQKVVHIGD IKVANDLPFV LFGGMNVLES RDLAMSICEH YVTVTQKLGI PYVFKASFDK  60
   61 ANRSSIHSYR GPGLEEGMKI FQELKQTFGV KIITDVHESA QAQPVAEVVD VIQLPAFLAR 120
  121 QTDLVEAMAR TGAVINVKKP QFISPGQMGN IVDKFKEGGN DQVILCDRGS NFGYDNLVVD 180
  181 MLGFNVMAQA TGGHPVIFDV THSLQCRDPF GAASGGRRAQ VAELARAGMA VGIAGLFLEA 240
  241 HPDPANAMCD GPSALPLAKL EPFLSQMKAI DDVVKSFPQL DTSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 87.0 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-deoxy-8-phosphooctulonate synthase activity
    		•  4.43037733440316 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.72022882819661 bayes_pls_golite062009
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  0.840107349031025 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.643395146148785 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.490222900376021 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009
  • transaldolase activity
    		•  0.337067552042715 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.0484922693826344 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle