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Protein Overview: SO1204

General Information:
Name(s) found: SO1204 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
Found 6 descriptions.
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  • translation initiation factor IF-2 [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 885 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTTVEKLA TEVGKSVERL IEQFSQAGIK KGQADNVSEA EKQQLLDYLK KQHGGDNAPT  60
   61 KMTLQRKTVS TLSVAGNGGQ SKDVKVEVRK TRTFVKRDVS DAVLKAEEEA KAKAEAEAKA 120
  121 KAETEAKAKA EAEAKAKVEA EAKAKAEAEA KAKAKAAAEV KVTKDTSPEA EAARIEAERL 180
  181 KAAQEAATKR KQAEEAAKAA EKARLLAEEN SKRWAEEERQ RLEAERYSDH HITTSKVARA 240
  241 AEDSSDMDEE KRGRRARNKN TAKTKRGGKD ARDGREKHMR NRSTAPESMA HGFNKPVAAV 300
  301 NRDVRIGETV TVAELAHLMA VKATEIIKQM MKMGSMVTIN QVLDQETAQL VAEEMGHKVV 360
  361 LIRENELEQQ VLSERDEEGG VKLEPRAPVV TIMGHVDHGK TSLLDYIRRA KVAAGEAGGI 420
  421 TQHIGAYHVE TENGMITFLD TPGHAAFTAM RARGAKATDI VVLVVAADDG VMPQTIEAIQ 480
  481 HAKAGNVPLI VAVNKMDKPE ADIDRVKSEL SQHGVMSEDW GGDNMFAFVS AKTGAGVDDL 540
  541 LEGILLQAEV LELKAVRDGM AAGVVIESQL DKGRGPVATI LVQEGTLRQG DIVLCGLEYG 600
  601 KIRAMKDENG RSITEAGPSI PVEILGLSGV PSAGDEATVV RDERKAREVA LYRQGKFRDV 660
  661 KLARQQKSKL ENMFANMTEG EVKELNIVLK ADVQGSLEAI TDSLMGLSTD EVKVNIIARG 720
  721 VGALTETDAT LAAASNAIMV GFNVRADAQA RKTIENESVD LRYYSVIYNL IDEVKAAMTG 780
  781 MLSPEFKQQI IGLAEVRDVF KSPKLGAIAG CMVTEGTIKR SAPIRVLRDN VVIFEGELES 840
  841 LRRFKDDVNE VRNGMECGIG VKNYNDVRVG DQIEVFETVE VARTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] FFAS03 1.45 BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2
    2 View Details [244..379] PSI-BLAST 6.69897 No description for 2e87A was found.
    3 View Details [380..885] PSI-BLAST 114.0 IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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