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Protein Overview: gi|151941525

General Information:
Name(s) found: gi|151941525 [NCBI NR]
Description(s) found:
  • gi|151941525|gb|EDN59888.1| CAAX geranylgeranyltransferase alpha subunit [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYDYSDVK PLPIETDLQD ELCRIMYTED YKRLMGLARA LISLNELSPR ALQLTAEIID  60
   61 VAPAFYTIWN YRFNIVRHMM SESEDTVLYL NKELDWLDEV TLNNPKNYQI WSYRQSLLKL 120
  121 HPSPSFKREL PILKLMIDDD SKNYHVWSYR KWCCLFFSDF QHELAYASDL IETDIYNNSA 180
  181 WTHRMFYWVN AKDVISKVEL ADELQFIMDK IQLVPQNISP WTYLRGFQEL FHDRLQWDSK 240
  241 VVDFATTFIG DVLSLPIGSP EDLPEIESSY ALEFLAYHWG ADPCTRDNAV KAYSLLAIKY 300
  301 DPIRKNLWHH KINNLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 343.927757 Protein farnesyltransferase alpha-subunit
    2 View Details [125..208] PSI-BLAST 343.927757 Protein farnesyltransferase alpha-subunit
    3 View Details [209..316] PSI-BLAST 343.927757 Protein farnesyltransferase alpha-subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein geranylgeranyltransferase activity
    		•  12.6759732522795 bayes_pls_golite062009
  • protein farnesyltransferase activity
    		•  12.1496415778348 bayes_pls_golite062009
  • prenyltransferase activity
    		•  11.9861287863026 bayes_pls_golite062009
  • CAAX-protein geranylgeranyltransferase activity
    		•  10.4593287273566 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  8.98854711542899 bayes_pls_golite062009
  • Rab geranylgeranyltransferase activity
    		•  6.64922604670914 bayes_pls_golite062009
  • acetylcholine receptor regulator activity
    		•  2.46174453725203 bayes_pls_golite062009
  • transferase activity
    		•  1.86754243570948 bayes_pls_golite062009
  • binding
    		•  1.29714843812125 bayes_pls_golite062009
  • catalytic activity
    		•  0.874200184943744 bayes_pls_golite062009
  • protein binding
    		•  0.478870166958436 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle