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Protein Overview: gi|151942594

General Information:
Name(s) found: gi|151942594 [NCBI NR]
Description(s) found:
  • gi|151942594|gb|EDN60940.1| tRNA-YW synthesizing protein [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 810 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGFRVAGAL VVGALTAAYL YFGGRFSIAL VIIVGYGIYC NEASGGSQDS QEKLDLNKQQ  60
   61 KKPCCSDKKI ADGGKKTGGC CSDKKNGGGK GGGCCSSKGG KKGGCCSSKG GKKGGCCSSK 120
  121 KNIGDNENTA TEVEKAVNYP VTVDFTEVFR KPTKKRSSTP KVFSKNSSSN SRVGKKLSVS 180
  181 KKIGPDGLIK SALTISNETL LSSQIYVLYS SLQGAASKAA KSVYDKLKEL DELTNEPKLL 240
  241 NLDDLSDFDD YFINVPVENA LYVLVLPSYD IDCPLDYFLQ TLEENANDFR VDSFPLRKLV 300
  301 GYTVLGLGDS ESWPEKFCYQ AKRADHWISR LGGRRIFPLG KVCMKTGGSA KIDEWTSLLA 360
  361 ETLKDDEPII YEYDENADSE EDEEEGNGSD ELGDVEDIGG KGSNGKFSGA DEIKQMVAKD 420
  421 SPTYKNLTKQ GYKVIGSHSG VKICRWTKNE LRGKGSCYKK SLFNIASSRC MELTPSLACS 480
  481 SKCVFCWRHG TNPVSKNWRW EVDEPEYILE NALKGHYSMI KQMRGVPGVI AERFAKAFEV 540
  541 RHCALSLVGE PILYPHINKF IQLLHQKGIT SFLVCNAQHP EALRNIVKVT QLYVSIDAPT 600
  601 KTELKKVDRP LYKDFWERMV ECLEILKTVQ NHQRTVFRLT LVKGFNMGDV SAYADLVQRG 660
  661 LPGFIEVKGA TFSGSSDGNG NPLTMQNIPF YEECVKFVKA FTTELQRRGL HYDLAAEHAH 720
  721 SNCLLIADTK FKINGEWHTH IDFDKFFVLL NSGKDFTYMD YLEKTPEWAL FGNGGFAPGN 780
  781 TRVYRKDKKK QNKENQETTT RETPLPPIPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] deduced N/A No confident structure predictions are available.
    2 View Details [124..173] PSI-BLAST 12.522879 Nitric oxide (NO) synthase oxygenase domain
    3 View Details [174..388] PSI-BLAST 67.39794 NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain
    4 View Details [389..445] PSI-BLAST 67.39794 NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain
    5 View Details [446..728] MSA 226.736997 View MSA. No confident structure predictions are available.
    6 View Details [729..810] MSA 2.247995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  0.62629924591908 bayes_pls_golite062009
  • binding
    		•  0.523120840489436 bayes_pls_golite062009
  • catalytic activity
    		•  0.275631658558537 bayes_pls_golite062009
    4
    Term Confidence Notes
  • catalytic activity
    		•  1.48331922124015 bayes_pls_golite062009
  • transferase activity
    		•  0.685192555939835 bayes_pls_golite062009
  • binding
    		•  0.60397276396442 bayes_pls_golite062009
  • protein binding
    		•  0.124485878765261 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle