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Protein Overview: gi|148506108, gi...

General Information:
Name(s) found: gi|167967857 [NCBI NR]
gi|148661956 [NCBI NR]
gi|148506108 [NCBI NR]
Description(s) found:
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  • gi|167967857|ref|ZP_02550134.1| hypothetical protein MtubH3_07416 [Mycobacterium tuberculosis H37Ra] [NCBI NR]
  • gi|148661956|ref|YP_001283479.1| hypothetical protein MRA_2155 [Mycobacterium tuberculosis H37Ra] [NCBI NR]
  • gi|148506108|gb|ABQ73917.1| hypothetical protein MRA_2155 [Mycobacterium tuberculosis H37Ra] [NCBI NR]
  • hypothetical protein MRA_2155 [Mycobacterium tuberculosis H37Ra] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Mycobacterium tuberculosis H37Ra
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDETGASSD HSDDVAQVVS RLIRFDTTNS GEPGTTKGEA ECARWVAEQL AEVGYQPEYV  60
   61 ESGAPGRGNV FARLAGADSS RGALLIHGHL DVVPAEPAEW SVHPFSGAIE DGYVWGRGAV 120
  121 DMKDMVGMMI VVARHLRQAA IVPPRDLVFA FVADEEHGGK YGSHWLVDNR PDLFDGITEA 180
  181 IGEVGGFSLT VPRHDGGERR LYLIETAEKG IQWMRLTARG RAGHGSMVHD QNAVTAVCEA 240
  241 VARLGRHQFP LVCTDTVAQF LAVVGEETGL AFDLDSPDLA GTIDKLGPMA RMLKAVLHDT 300
  301 ANPTMLKAGY KANVVPATAE AVVDCRVLPG RRAAFEAEVD ALIGPDVTRE WVSDLPSYET 360
  361 TFDGDLVAAM NAAVLAVDPD GRTVPYMLSG GTDAKAFARL GIRCFGFSPL RLPPDLDFTS 420
  421 LFHGVDERVP IDGLRFGTEV LTHLLTHC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 53.045757 Crystal structure of succinyl diaminopimelate desuccinylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.53599751822623 bayes_pls_golite062009
  • hydrolase activity
    		•  3.17104798571343 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  2.83557334423635 bayes_pls_golite062009
  • catalytic activity
    		•  2.00064748759729 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.960517137038552 bayes_pls_golite062009
  • binding
    		•  0.456088952797852 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  0.389857234977383 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle