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Protein Overview: gi|150422455, gi...

General Information:
Name(s) found: gi|254291598 [NCBI NR]
gi|197751030 [NCBI NR]
gi|150422455 [NCBI NR]
Description(s) found:
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  • gi|254291598|ref|ZP_04962387.1| orotate phosphoribosyltransferase [Vibrio cholerae AM-19226] [NCBI NR]
  • gi|197751030|ref|YP_002174445.1| orotate phosphoribosyltransferase [Vibrio cholerae AM-19226] [NCBI NR]
  • gi|150422455|gb|EDN14413.1| orotate phosphoribosyltransferase [Vibrio cholerae AM-19226] [NCBI NR]
    • Organism: Vibrio cholerae AM-19226
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKAYQREFI EFALEKQVLK FGEFTLKSGR KSPYFFNAGL FNTGRDLARL GRFYAAALVD  60
   61 SGIEFDVLFG PAYKGIPIAT TTAVALADHH DVDTPYCFNR KEAKNHGEGG NLVGSKLEGR 120
  121 VMLVDDVITA GTAIRESMEL IQANKADLAG VLVAIDRQEK GKGELSAIQE VERDFGCAVI 180
  181 SIVSLTDLIT YLEQQGNNTE HLEAVKAYRA QYGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 51.30103 Orotate PRTase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenine phosphoribosyltransferase activity
    		•  3.1748712918814 bayes_pls_golite062009
  • uracil phosphoribosyltransferase activity
    		•  3.0470646511978 bayes_pls_golite062009
  • hypoxanthine phosphoribosyltransferase activity
    		•  2.97347277288245 bayes_pls_golite062009
  • transferase activity
    		•  2.73727660668741 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.53679639481311 bayes_pls_golite062009
  • catalytic activity
    		•  2.30431811394775 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.21367942706564 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  2.02298774328915 bayes_pls_golite062009
  • ribose phosphate diphosphokinase activity
    		•  1.51875493459374 bayes_pls_golite062009
  • nucleobase binding
    		•  1.28671115202467 bayes_pls_golite062009
  • purine binding
    		•  1.24786927434743 bayes_pls_golite062009
  • amidophosphoribosyltransferase activity
    		•  0.932396739123353 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  0.749909396904601 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.552133387792911 bayes_pls_golite062009
  • binding
    		•  0.535390228935555 bayes_pls_golite062009
  • DNA binding
    		•  0.439741935655503 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.396538943915776 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle