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Protein Overview: LSM7

General Information:
Name(s) found: LSM7 / YNL147W [SGD]
Description(s) found:
Found 16 descriptions.
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  • Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 115 amino acids

    Gene Ontology:
    Cellular Component: U4/U6 x U5 tri-snRNP complex [IDALink to PubMed article][NASLink to PubMed article]
    nucleolus [IDALink to PubMed article]
    U6 snRNP [IDALink to PubMed articleLink to PubMed articleLink to PubMed article][TASLink to PubMed article]
    small nucleolar ribonucleoprotein complex [IPILink to PubMed article]
    Biological Process: telomere maintenance [IMPLink to PubMed article]
    mRNA catabolic process [IMPLink to PubMed article][IPILink to PubMed article][TASLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [IMPLink to PubMed article][TASLink to PubMed article]
    Molecular Function: RNA binding [IPILink to PubMed article][TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQQHSKSEN KPQQQRKKFE GPKREAILDL AKYKDSKIRV KLMGGKLVIG VLKGYDQLMN  60
   61 LVLDDTVEYM SNPDDENNTE LISKNARKLG LTVIRGTILV SLSSAEGSDV LYMQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data LSM7 Huh WK, et al. (2003)

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle