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Protein Overview: SO9018

General Information:
Name(s) found: SO9018 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • ISSod10 transposase OrfB (SO2276 and SO2875) [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 185 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNTPGHVA LDRIDVWFQD EARFGQQNTT TRIWAEKGTR PRAVKQQQFE SAYLFGALCP  60
   61 ATGATEAILA PFANSDYMHE HLKLISAATE FGRHALVIMD GAGWHQRDLA DDFDNLSIVK 120
  121 LPPYSPELNP MEQVWQWLRQ HVLANRSFKG YDDIVEQCSI AWNTFIKEPL RVMQLCSRQW 180
  181 AKMNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 28.69897 No description for 2f7tA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle