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Protein Overview: SO3903

General Information:
Name(s) found: SO3903 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • MutT/nudix family protein [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 200 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPQVFSQTD IEILEKKSLY QGFFALEQFT FKHKLFAGGW SQPVTREVFE RGHAVVVLPY  60
   61 DLKRDKIVLI EQVRFPALAT TKSPWLMELV AGMIAPDEMP LDVAHRELLE ETGLTASNIH 120
  121 FVNSYLASPG GSTERFYFYW AEVDSSQAQG LHGLADEHED IRLHVVDREA AYNGVVTGEI 180
  181 DNASTVIGLQ WLQLNYQQLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] PSI-BLAST 38.0 ADP-ribose pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.49075808737475 bayes_pls_golite062009
  • hydrolase activity
    		•  1.0879699007552 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.859040726089354 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.859001295204634 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.231401568856773 bayes_pls_golite062009
  • binding
    		•  0.165092558977235 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle