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Protein Overview: SO3553

General Information:
Name(s) found: SO3553 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • sulfate permease family protein [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 588 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPHVSHSAH LFSLRIAHAL NEACVKDRYS FKRFGQDLLA GLTVGIIAIP LAMALAIASG  60
   61 VPPQYGLYTA IVGGFIIAMT GGSRYSVSGP TAAFVVLLYP IAQQFGLAGL LIATVMSGMM 120
  121 LVAMAMLRLG RLILYIPESV TLGFTAGIGV VIATLQLKDF FGLQIEHMPE QYFAKLMALG 180
  181 QALPSLHLPS LFIAAATLAT MLLWPRLKIP VPAHLPAIAL GSILALILNA MGAEIETIGT 240
  241 RFHYQLTDGG IGSGIPAVLP HFEWPWLQTG PNGQAFEFNL AAFQALLPAA FAIAMLGAIE 300
  301 SLLCAVVLDG MTGKRHSANS ELLGQGIGNI IAPFFGGIPA TAAIARSAAN VKAGAQSPIA 360
  361 SMIHALVVLI GLVALAGILA YLPMSAMAAL LLVVAWNMSE APKAVHLLKT APTSDILVFL 420
  421 SCFSLTVIFD MVIAISVGII LAALLFMKEI AEMTKLYDIS SNKRYVDQSL PADWAVLKIN 480
  481 GPLFFAAADR IFAEIASLTQ DKQVIVLYLD GVSILDAGGL AALSKLIEKC KLNQTKLLIT 540
  541 DLQFQPIRTL AKAKIQPVEG VLKFYPTLRE ALTEAPSPEL EATPEATD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] MSA 7.811996 View MSA. No confident structure predictions are available.
    2 View Details [169..254] deduced N/A No confident structure predictions are available.
    3 View Details [255..451] MSA 8.821993 View MSA. No confident structure predictions are available.
    4 View Details [452..588] PSI-BLAST 12.221849 Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.76935925638807 bayes_pls_golite062009
  • protein binding
    		•  1.39062728142841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle