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Protein Overview: SO2949

General Information:
Name(s) found: SO2949 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • prophage LambdaSo minor tail protein L [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSADIQTLE PGNEIILYEI DGTAFGADIL RFHAHNIPYS ETDLNQPNLP ARIIHWQGEQ  60
   61 YSAWPAQLEG VEVNSDGSPS TPTLTVANID GSISALCLYF QNMEQAKVTI HRTLAKYLDA 120
  121 ANFHTGNSEA DPTQEAVEIW YVDKKVNEDN VAVTFELSNP ADLSGYKIGR QMTAYCYWCQ 180
  181 RGEYRGADCG YTGEAMFTDE DQPTDNPALD QCSGTIKGCT LRFGENNELP HGGFPSVRLI 240
  241 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] MSA 4.025983 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle