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Protein Overview: SO2436

General Information:
Name(s) found: SO2436 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
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  • gi|81845822|sp|Q8EEE6.1|CMOB_SHEON RecName: Full=tRNA (mo5U34)-methyltransferase [NCBI NR]
  • tRNA (mo5U34)-methyltransferase OS=Shewanella oneidensis GN=cmoB PE=3 SV=1 [Swiss-Prot]
  • methyltransferase putative [shew_pnnl_plus_contams_psm.fasta]
  • tRNA (mo5U34)-methyltransferase OS=Shewanella oneidensis (strain MR-1) GN=cmoB PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Shewanella oneidensis
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINFSSFYQQ IADSNLQHWL ETLPAILGKW QREHKHGNLP KWEKVLNKLH YPSPDSVDLV  60
   61 DSVTIGTGEQ LTPGEKEKLE NLLRLFMPWR KGPFHIHGIH IDTEWRSDWK WDRVKPHISP 120
  121 LQNRTVLDVG CGSGYHMWRM LGAGAKRVVG IDPSPLFLCQ FEAVKRLSGE NHPVHLLPLG 180
  181 IEELPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRMGG ELVLETLVID GDENAVLVPQ 240
  241 DRYGKMNNVW FIPSVAALML WLKKCDFTDI RCVDTDVTAL AEQRRTDWMP NESLVEYLDP 300
  301 KDITKTVEGY PAPKRATIIA VKNQPNQDLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] PSI-BLAST 10.0 The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution
    2 View Details [71..330] PSI-BLAST 24.30103 CmaA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.558878917426836 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.557560946446304 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.0605581837493382 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle