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Protein Overview: DHSC_ECOLI

General Information:
Name(s) found: DHSC_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|85544086|pdb|2ACZ|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone Binding Site [NCBI NR]
  • pir||DEECS4 succinate dehydrogenase (EC 1.3.99.1) cytochrome b556 - Escherichia coli (strain K-12) [NCBI NR]
  • gi|60392191|sp|P69054.1|DHSC_ECOLI RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 [NCBI NR]
  • gi|495784|gb|AAA24616.1| succinate dehydrogenase [NCBI NR]
  • gi|42923|emb|CAA25485.1| unnamed protein product [Escherichia coli] [NCBI NR]
  • gi|28948824|pdb|1NEN|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Dinitrophenol-17 Inhibitor Co-Crystallized At The Ubiquinone Binding Site [NCBI NR]
  • gi|28948820|pdb|1NEK|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound [NCBI NR]
  • pir||A85573 succinate dehydrogenase, cytochrome b556 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||B90722 succinate dehydrogenase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209776546|gb|ACI86585.1| succinate dehydrogenase [Escherichia coli] [NCBI NR]
  • gi|209776544|gb|ACI86584.1| succinate dehydrogenase [Escherichia coli] [NCBI NR]
  • gi|209776542|gb|ACI86583.1| succinate dehydrogenase [Escherichia coli] [NCBI NR]
  • gi|209776540|gb|ACI86582.1| succinate dehydrogenase [Escherichia coli] [NCBI NR]
  • gi|209776538|gb|ACI86581.1| succinate dehydrogenase [Escherichia coli] [NCBI NR]
  • Succinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556) - Escherichia coli [Swiss-Prot]
  • succinate dehydrogenase, cytochrome b556 [Escherichia coli K12]gi|15830000|ref|NP_308773.1| succinate dehydrogenase [Escherichia coli O157:H7]gi|15800425|ref|NP_286437.1| succinate dehydrogenase, cytochrome b556 [Escherichia coli O157:H7 EDL933]gi|1461 [nrdb_11152004_Chlamydomonas]
  • Succinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound [nr-271106-contam.fasta]
  • Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone Binding Site [nr-271106-contam.fasta]
  • succinate dehydrogenase [nr-271106-contam.fasta]
  • unnamed protein product [Escherichia coli] [nr-271106-contam.fasta]
  • Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Dinitrophenol-17 Inhibitor Co-Crystallized At The Ubiquinone Binding Site [nr-271106-contam.fasta]
  • Succinate dehydrogenase cytochrome b556 subunit OS=Escherichia coli (strain K12) GN=sdhC PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 129 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNVKKQRP VNLDLQTIRF PITAIASILH RVSGVITFVA VGILLWLLGT SLSSPEGFEQ  60
   61 ASAIMGSFFV KFIMWGILTA LAYHVVVGIR HMMMDFGYLE ETFEAGKRSA KISFVITVVL 120
  121 SLLAGVLVW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 32.045757 Succinate dehydrogenase subunit SdhC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate dehydrogenase activity
    		•  10.6133558935785 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.24661342841192 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.99989196344185 bayes_pls_golite062009
  • electron carrier activity
    		•  4.50772505551128 bayes_pls_golite062009
  • binding
    		•  1.1076219212629 bayes_pls_golite062009
  • catalytic activity
    		•  0.971825536251904 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle