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Protein Overview: CYC_FAGES

General Information:
Name(s) found: CYC_FAGES [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1 [Swiss-Prot]
    • Organism: Fagopyrum esculentum
    Length: 111 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATFSEAPPGN IKSGEKIFKT KCAQCHTVEK GAGHKQGPNL NGLFGRQSGT TAGYSYSAAN  60
   61 KNKAVTWGED TLYEYLLNPK KYIPGTKMVF PGLKKPQERA DLIAYLKBST Z

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 36.154902 STRUCTURE OF RICE FERRICYTOCHROME C AT 2.0 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  7.77694826742571 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  7.77694826742571 bayes_pls_golite062009
  • electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity
    		•  5.3228546115966 bayes_pls_golite062009
  • electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity
    		•  4.97969104367667 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  4.83198573144889 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.80453374142732 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  4.69221581420605 bayes_pls_golite062009
  • electron carrier activity
    		•  4.50051625202265 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  4.39250939893637 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.11195915185456 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  3.07137767450073 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  3.05900853572871 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  2.75675744166378 bayes_pls_golite062009
  • peroxidase activity
    		•  2.75675744166378 bayes_pls_golite062009
  • antioxidant activity
    		•  2.60087791856484 bayes_pls_golite062009
  • phosphatase activity
    		•  2.58257339159796 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  2.48742191899955 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.67966224915812 bayes_pls_golite062009
  • binding
    		•  1.60003804759784 bayes_pls_golite062009
  • transporter activity
    		•  1.44083733311658 bayes_pls_golite062009
  • protein binding
    		•  1.33090393131805 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.28161778948702 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.15573917988688 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.01443199299167 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.881486298760893 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.783993292151034 bayes_pls_golite062009
  • hydrolase activity
    		•  0.624991704964657 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle