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Protein Overview: COX6A_CYPCA

General Information:
Name(s) found: COX6A_CYPCA [Swiss-Prot]
Description(s) found:
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  • gi|5921902|sp|O13082.1|COX6A_CYPCA RecName: Full=Cytochrome c oxidase subunit 6A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide VIa; Flags: Precursor [NCBI NR]
  • gi|2138310|gb|AAB58361.1| cytochrome c oxidase subunit VIa [Cyprinus carpio] [NCBI NR]
  • Cytochrome c oxidase polypeptide 6A, mitochondrial OS=Cyprinus carpio PE=3 SV=1 [Swiss-Prot]
  • (O13082) Cytochrome c oxidase polypeptide VIa, mitochondrial precursor (EC 1.9.3.1) [Swiss-Prot]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Cyprinus carpio PE=3 SV=1 [Swiss-Prot]
  • cytochrome c oxidase subunit VIa [Cyprinus carpio]gi|5921902|sp|O13082|COXE_CYPCA CYTOCHROME C OXIDASE POLYPEPTIDE VIA PRECURSOR [nrdb_11152004_Chlamydomonas]
  • Cytochrome c oxidase polypeptide VIa, mitochondrial precursor [nr-271106-contam.fasta]
  • cytochrome c oxidase subunit VIa [Cyprinus carpio] [nr-271106-contam.fasta]
    • Organism: Cyprinus carpio
    Length: 102 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSPAATVA RRRLAAASQG SHEGGARTWK ILSFVLALPG VGVCMANAYM KMQAHSHDPP  60
   61 EFVPYPHLRI RTKPWPWGDG NHSLFHNAHT NALPTGYEGP HH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] PSI-BLAST 28.221849 Bovine heart cytochrome c oxidase at the fully oxidized state

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  0.43268723383487 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  0.43268723383487 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  0.280428750542101 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.13082545919054 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.04800265254548 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle